Rubus idaeus
ncbi_taxid: 32247 - Rubus idaeus(species); all_childs: 59501, 59503, 2697234, 2953672, 2982852, 3058169
taxonomy name: Rubus idaeus (species)
ancestor: Rubus (genus)
Child Taxonomy
| taxonomy name | rank | note |
|---|---|---|
| Rubus idaeus subsp. idaeus | subspecies | ncbi_taxid: 59501 - Rubus idaeus subsp. idaeus(subspecies); all_childs: |
| Rubus idaeus subsp. strigosus | subspecies | ncbi_taxid: 59503 - Rubus idaeus subsp. strigosus(subspecies); all_childs: |
| Rubus idaeus var. aculeatissimus | varietas | ncbi_taxid: 2697234 - Rubus idaeus var. aculeatissimus(varietas); all_childs: |
| Rubus idaeus subsp. nipponicus | subspecies | ncbi_taxid: 2953672 - Rubus idaeus subsp. nipponicus(subspecies); all_childs: 2953673 |
| Rubus idaeus f. concolor | forma | ncbi_taxid: 2982852 - Rubus idaeus f. concolor(forma); all_childs: |
| Rubus idaeus var. borealisinensis | varietas | ncbi_taxid: 3058169 - Rubus idaeus var. borealisinensis(varietas); all_childs: |
Enzyme Proteins
| protein id | name | ec_number | function |
|---|
Metabolites
LCMS Annotations
Literature Annotations
| Metabolite | Database Reference | Structure |
|---|---|---|
| 11-cis-Retinol Formula: C20H30O Exact Mass: 286.2297 Source ID: CNP0254958.0 |
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| beta-Carotene Formula: C40H56 Exact Mass: 536.4382 Source ID: CNP0233748.0 |
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| D-Glucose Formula: C6H12O6 Exact Mass: 180.0634 Source ID: CNP0210547.4 |
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| Rutin Formula: C27H30O16 Exact Mass: 610.1534 Source ID: CNP0268715.1 |
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| Cyanidin 3-O-rutinoside Formula: C27H31O15 Exact Mass: 595.1663 Source ID: CNP0486998.1 |
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| Ascorbic acid Formula: C6H8O6 Exact Mass: 176.0321 Source ID: CNP0367758.1 |
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| 4-Hydroxybenzaldehyde Formula: C7H6O2 Exact Mass: 122.0368 Source ID: CNP0230702.0 |
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| beta-Sitosterol Formula: C29H50O Exact Mass: 414.3861 Source ID: CNP0236620.1 |
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| Kaempferol Formula: C15H10O6 Exact Mass: 286.0477 Source ID: CNP0292269.0 |
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| Quercetin Formula: C15H10O7 Exact Mass: 302.0427 Source ID: CNP0103504.0 |
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| Ferulate Formula: C10H10O4 Exact Mass: 194.0579 Source ID: CNP0304940.0 |
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| Hyperin Formula: C21H20O12 Exact Mass: 464.0955 Source ID: CNP0180599.1 |
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| Quercitrin Formula: C21H20O11 Exact Mass: 448.1006 Source ID: CNP0171505.1 |
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| Isoquercitrin Formula: C21H20O12 Exact Mass: 464.0955 Source ID: CNP0180599.2 |
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| Gallate Formula: C7H6O5 Exact Mass: 170.0215 Source ID: CNP0133244.0 |
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| Caffeate Formula: C9H8O4 Exact Mass: 180.0423 Source ID: CNP0186784.0 |
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| 4-Coumarate Formula: C9H8O3 Exact Mass: 164.0473 Source ID: CNP0255341.0 |
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| (-)-Epicatechin Formula: C15H14O6 Exact Mass: 290.079 Source ID: CNP0293352.2 |
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| Esculetin Formula: C9H6O4 Exact Mass: 178.0266 Source ID: CNP0386988.0 |
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| 4-Hydroxybenzoate Formula: C7H6O3 Exact Mass: 138.0317 Source ID: CNP0253685.0 |
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| trans-Cinnamate Formula: C9H8O2 Exact Mass: 148.0524 Source ID: CNP0390407.0 |
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| Salicylate Formula: C7H6O3 Exact Mass: 138.0317 Source ID: CNP0230203.0 |
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| Vanillate Formula: C8H8O4 Exact Mass: 168.0423 Source ID: CNP0122021.0 |
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| 4-Hydroxy-3-methoxy-benzaldehyde Formula: C8H8O3 Exact Mass: 152.0473 Source ID: CNP0270199.0 |
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| (+)-Catechin Formula: C15H14O6 Exact Mass: 290.079 Source ID: CNP0293352.3 |
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| L-Tryptophan Formula: C11H12N2O2 Exact Mass: 204.0899 Source ID: CNP0167976.1 |
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| Cyanidin Formula: C15H11O6 Exact Mass: 287.0556 Source ID: CNP0492502.0 |
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| alpha-Tocopherol Formula: C29H50O2 Exact Mass: 430.3811 Source ID: CNP0338526.1 |
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| Choline Formula: C5H14NO Exact Mass: 104.1075 Source ID: CNP0161849.0 |
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| Quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside Formula: C27H30O17 Exact Mass: 626.1483 Source ID: CNP0235373.1 |
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| Thiamine Formula: C12H17N4OS Exact Mass: 265.1123 Source ID: CNP0538996.0 |
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| L-Arginine Formula: C6H14N4O2 Exact Mass: 174.1117 Source ID: CNP0257247.1 |
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| Ellagic acid Formula: C14H6O8 Exact Mass: 302.0063 Source ID: CNP0224900.0 |
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| Dihydroxybenzoic acid Formula: C7H6O4 Exact Mass: 154.0266 Source ID: CNP0348948.0 |
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| Pyridoxine Formula: C8H11NO3 Exact Mass: 169.0739 Source ID: CNP0297581.0 |
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| Kaempferol 3-O-glucoside Formula: C21H20O11 Exact Mass: 448.1006 Source ID: CNP0187953.2 |
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| Dopamine Formula: C8H11NO2 Exact Mass: 153.079 Source ID: CNP0254743.0 |
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| L-Citrulline Formula: C6H13N3O3 Exact Mass: 175.0957 Source ID: CNP0209633.1 |
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| Alanine Formula: C3H7NO2 Exact Mass: 89.0477 Source ID: CNP0313085.1 |
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| Phenethylamine Formula: C8H11N Exact Mass: 121.0891 Source ID: CNP0141127.0 |
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| Shikimate Formula: C7H10O5 Exact Mass: 174.0528 Source ID: CNP0162867.1 |
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| Neochlorogenic acid Formula: C16H18O9 Exact Mass: 354.0951 Source ID: CNP0148557.2 |
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| Asparagine Formula: C4H8N2O3 Exact Mass: 132.0535 Source ID: CNP0267849.1 |
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| Isoleucine Formula: C6H13NO2 Exact Mass: 131.0946 Source ID: CNP0337843.1 |
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| Hexacosan-1-ol Formula: C26H54O Exact Mass: 382.4174 Source ID: CNP0154771.0 |
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| alpha-Carotene Formula: C40H56 Exact Mass: 536.4382 Source ID: CNP0220836.1 |
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| 4-hydroxy-7,8-dimethyl-10-[(2S,3S,4R)-2,3,4,5-tetrahydroxypentyl]benzo[g]pteridin-2-one Formula: C17H20N4O6 Exact Mass: 376.1383 Source ID: CNP0561800.1 |
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| L-Threonine Formula: C4H9NO3 Exact Mass: 119.0582 Source ID: CNP0361197.1 |
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| Triacontan-1-ol Formula: C30H62O Exact Mass: 438.48 Source ID: CNP0150741.0 |
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| L-Lysine Formula: C6H14N2O2 Exact Mass: 146.1055 Source ID: CNP0204700.1 |
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| Nicotinate Formula: C6H5NO2 Exact Mass: 123.032 Source ID: CNP0319168.0 |
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| Lutein Formula: C40H56O2 Exact Mass: 568.428 Source ID: CNP0216202.1 |
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| Glycine Formula: C2H5NO2 Exact Mass: 75.032 Source ID: CNP0563879.0 |
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| Hexacosyl trans-ferulate Formula: C36H62O4 Exact Mass: 558.4648 Source ID: CNP0379893.0 |
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| Quercetin 3-O-glucuronide Formula: C21H18O13 Exact Mass: 478.0747 Source ID: CNP0230774.1 |
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| Procyanidin B2 Formula: C30H26O12 Exact Mass: 578.1424 Source ID: CNP0192174.3 |
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| Imperatorin Formula: C16H14O4 Exact Mass: 270.0892 Source ID: CNP0270767.0 |
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| Dihydrokaempferol Formula: C15H12O6 Exact Mass: 288.0634 Source ID: CNP0230258.2 |
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| Procyanidin B4 Formula: C30H26O12 Exact Mass: 578.1424 Source ID: CNP0192174.4 |
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| Arjugenin Formula: C30H48O6 Exact Mass: 504.3451 Source ID: CNP0252493.2 |
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| Glutamine Formula: C5H10N2O3 Exact Mass: 146.0691 Source ID: CNP0361973.1 |
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| Pantothenate Formula: C9H17NO5 Exact Mass: 219.1107 Source ID: CNP0153142.1 |
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| Pelargonidin Formula: C15H11O5 Exact Mass: 271.0606 Source ID: CNP0525213.0 |
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| Kaempferol 3-glucuronide Formula: C21H18O12 Exact Mass: 462.0798 Source ID: CNP0263661.1 |
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Formula: C30H48O4 Exact Mass: 472.3552 Source ID: CNP0227468.5 |
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Formula: C27H30O16 Exact Mass: 610.1534 Source ID: CNP0477936.0 |
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Formula: C30H48O5 Exact Mass: 488.3502 Source ID: CNP0127153.5 |
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| 4-(4-Hydroxyphenyl)-2-butanone Formula: C10H12O2 Exact Mass: 164.0837 Source ID: CNP0218694.0 |
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| NSC715079 Formula: C30H48O5 Exact Mass: 488.3502 Source ID: CNP0076350.1 |
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| Hyperin Formula: C21H20O12 Exact Mass: 464.0955 Source ID: CNP0602823.0 |
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| Tribuloside Formula: C30H26O13 Exact Mass: 594.1373 Source ID: CNP0167834.3 |
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| Cyanidin 3-O-glucoside Formula: C21H21O11 Exact Mass: 449.1084 Source ID: CNP0583867.1 |
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| pentadecanethioic O-acid Formula: C15H30OS Exact Mass: 258.2017 Source ID: CNP0085720.0 |
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| Delphinidin 3-O-glucoside Formula: C21H21O12 Exact Mass: 465.1033 Source ID: CNP0586863.2 |
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Formula: C30H48O4 Exact Mass: 472.3552 Source ID: CNP0141707.1 |
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| FSL0569 Formula: C19H19N7O6 Exact Mass: 441.1397 Source ID: CNP0528342.1 |
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| Crataegolic acid Formula: C30H48O4 Exact Mass: 472.3552 Source ID: CNP0227468.7 |
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| Betulonic acid Formula: C30H46O3 Exact Mass: 454.3447 Source ID: CNP0115283.2 |
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| Phlorizin Formula: C21H24O10 Exact Mass: 436.1369 Source ID: CNP0290030.2 |
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| kaempferol-3-rutinoside Formula: C27H30O15 Exact Mass: 594.1585 Source ID: CNP0222584.6 |
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| 5-Hydroxy-3,6,7,8-tetramethoxyflavone Formula: C19H18O7 Exact Mass: 358.1052 Source ID: CNP0167350.0 |
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| 1-hydroxyisoquinoline-4-carboxylic acid Formula: C10H7NO3 Exact Mass: 189.0426 Source ID: CNP0399211.0 |
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| Cyanidin 3-O-glucoside Formula: C21H21O11 Exact Mass: 449.1084 Source ID: CNP0583867.3 |
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| Putrescine Formula: C4H12N2 Exact Mass: 88.1 Source ID: CNP0116270.0 |
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| Fupenzic acid Formula: C30H44O5 Exact Mass: 484.3189 Source ID: CNP0161509.1 |
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| 5-[5,7-dihydroxy-3-[(2~{S},3~{R},4~{S},5~{S},6~{R})-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxy-chromenylium-2-yl]-2-hydroxy-phenolate;hydrochloride Formula: C21H21ClO11 Exact Mass: 484.0772 Source ID: CNP0568612.2 |
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| Corosolic acid Formula: C30H48O4 Exact Mass: 472.3552 Source ID: CNP0215187.5 |
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| methyl 2-(2,3-dihydroxyindol-3-yl)acetate Formula: C11H11NO4 Exact Mass: 221.0688 Source ID: CNP0534786.0 |
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| Sanguiin H6 Formula: C82H54O52 Exact Mass: 1870.1581 Source ID: CNP0188888.1 |
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| Pelargonidin 3-O-sophoroside Formula: C27H31O15 Exact Mass: 595.1663 Source ID: CNP0591929.1 |
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| Pelargonidin 3-O-glucoside Formula: C21H21O10 Exact Mass: 433.1135 Source ID: CNP0525096.1 |
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| Stigmast-5-en-3-ol, oleate Formula: C47H82O2 Exact Mass: 678.6314 Source ID: CNP0148171.1 |
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| 30-Hydroxy-11-oxo-beta-amyrin Formula: C30H48O3 Exact Mass: 456.3603 Source ID: CNP0326904.1 |
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| Adipate Formula: C6H10O4 Exact Mass: 146.0579 Source ID: CNP0296801.0 |
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| Pelargonidin 3-O-rutinoside Formula: C27H31O14 Exact Mass: 579.1714 Source ID: CNP0605108.1 |
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| kaempferol 3-O-beta-D-allopyranoside Formula: C21H20O11 Exact Mass: 448.1006 Source ID: CNP0187953.8 |
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| (2R,5R)-2-(6-amino-9H-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol Formula: C10H13N5O4 Exact Mass: 267.0967 Source ID: CNP0216822.5 |
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| Kaempferol-3-O-rutinoside Formula: C27H30O15 Exact Mass: 594.1585 Source ID: CNP0222584.7 |
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Formula: C35H60O6 Exact Mass: 576.439 Source ID: CNP0324146.17 |
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Formula: C30H54O4 Exact Mass: 478.4022 Source ID: CNP0152512.1 |
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| Cyanidin 3-O-sophoroside Formula: C27H31O16 Exact Mass: 611.1612 Source ID: CNP0571402.1 |
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| 1-[(2R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-hydroxypyrimidin-2-one Formula: C9H12N2O6 Exact Mass: 244.0695 Source ID: CNP0553636.3 |
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| (2R,3R,4S,5R)-2-(6-hydroxy-2-imino-3H-purin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol Formula: C10H13N5O5 Exact Mass: 283.0917 Source ID: CNP0560283.1 |
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| methyl 1-hydroxyisoquinoline-4-carboxylate Formula: C11H9NO3 Exact Mass: 203.0582 Source ID: CNP0079758.0 |
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| Dihydrooroxylin Formula: C16H14O5 Exact Mass: 286.0841 Source ID: CNP0229393.1 |
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| cis-4-Hydroxy-L-proline Formula: C5H9NO3 Exact Mass: 131.0582 Source ID: CNP0368925.3 |
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| Hyperin Formula: C21H20O12 Exact Mass: 464.0955 Source ID: CNP0180599.13 |
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| Malvidin 3-O-glucoside Formula: C23H25O12 Exact Mass: 493.1346 Source ID: CNP0503096.5 |
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| Tiliroside Formula: C30H26O13 Exact Mass: 594.1373 Source ID: CNP0167834.4 |
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| (1S,4aR,6aS,6bR,10R,11R,12aR,14bS)-1,10,11-trihydroxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid Formula: C30H48O5 Exact Mass: 488.3502 Source ID: CNP0586910.1 |
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| Actinidic acid Formula: C30H46O5 Exact Mass: 486.3345 Source ID: CNP0268104.1 |
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| Histidine Formula: C6H9N3O2 Exact Mass: 155.0695 Source ID: CNP0584490.2 |
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| 19alpha-hydroxyasiatic acid-28-O-beta-D-glucopyrannoside Formula: C36H58O11 Exact Mass: 666.3979 Source ID: CNP0183445.5 |
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Formula: C32H56O5 Exact Mass: 520.4128 Source ID: CNP0305791.1 |
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| 3-Epioleanolic acid Formula: C30H48O3 Exact Mass: 456.3603 Source ID: CNP0243832.1 |
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| Ribisin B Formula: C14H14O5 Exact Mass: 262.0841 Source ID: CNP0124465.1 |
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| Polyoxyethylene 40 monostearate Formula: C20H40O3 Exact Mass: 328.2977 Source ID: CNP0168351.0 |
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| 2-Oxo-1,2-dihydroquinoline-4-carboxylate Formula: C10H7NO3 Exact Mass: 189.0426 Source ID: CNP0287412.0 |
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| 2-Oxo-1,2-dihydroquinoline-4-carboxylate Formula: C10H7NO3 Exact Mass: 189.0426 Source ID: CNP0484710.0 |
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| 1-hydroxyisoquinoline-4-carboxylic acid Formula: C10H7NO3 Exact Mass: 189.0426 Source ID: CNP0494734.0 |
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| Cyanidin 3-sophoroside Formula: C27H31O16 Exact Mass: 611.1612 Source ID: CNP0571402.2 |
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| Cyanidin 3-sambubioside Formula: C26H29O15 Exact Mass: 581.1506 Source ID: CNP0491541.4 |
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| Procyanidin B4 Formula: C30H26O12 Exact Mass: 578.1424 Source ID: CNP0192174.18 |
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| Pelargonidin 3-(2glu glucosylrutinoside) Formula: C33H41O19 Exact Mass: 741.2242 Source ID: CNP0579931.2 |
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| 2-amino-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-3H-purin-6-one Formula: C10H13N5O5 Exact Mass: 283.0917 Source ID: CNP0591075.3 |
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| methyl 1-hydroxyisoquinoline-4-carboxylate Formula: C11H9NO3 Exact Mass: 203.0582 Source ID: CNP0502892.0 |
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| Quercetin 3-O-xylosyl-glucuronide Formula: C26H26O17 Exact Mass: 610.117 Source ID: CNP0021885.1 |
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| Ellagic acid arabinoside Formula: C19H14O12 Exact Mass: 434.0485 Source ID: CNP0238357.3 |
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| Ellagic acid acetyl-arabinoside Formula: C21H16O13 Exact Mass: 476.0591 Source ID: CNP0104355.1 |
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| Ellagic acid acetyl-xyloside Formula: C21H16O13 Exact Mass: 476.0591 Source ID: CNP0104355.2 |
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Formula: C123H80O78 Exact Mass: 2804.2293 Source ID: CNP0050552.1 |
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| Pelargonidin 3-sophoroside Formula: C28H33O14 Exact Mass: 593.187 Source ID: CNP0568262.1 |
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| Creatinine Formula: C4H7N3O Exact Mass: 113.0589 Source ID: CNP0479644.0 |
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| (2~{S})-2-amino-5-[(~{N},~{N}-dimethylcarbamimidoyl)amino]pentanoic acid Formula: C8H18N4O2 Exact Mass: 202.143 Source ID: CNP0258830.2 |
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