Pelargonidin 3-sophoroside (BioCAD00000030664)

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Metabolite Card

Formula: C28H33O14 (593.187)
SMILES: C[C@H]1[C@H](O[C@H]2[C@H](OC3=CC4=C(C=C(O)C=C4O)[O+]=C3C3=CC=C(O)C=C3)O[C@H](CO)[C@@H](O)[C@@H]2O)O[C@H](CO)[C@@H](O)[C@@H]1O

Synonyms [en]

Pelargonidin 3-sophoroside; Pelargonidin 3-O-sophoroside; 3-[(2~{S},3~{R},4~{S},5~{S},6~{R})-3-[(2~{S},3~{R},4~{R},5~{S},6~{R})-4,5-dihydroxy-6-(hydroxymethyl)-3-methyl-tetrahydropyran-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxy-2-(4-hydroxyphenyl)chromenylium-5,7-diol; 3-{[(2S,3R,4S,5S,6R)-3-{[(2S,3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-methyloxan-2-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5,7-dihydroxy-2-(4-hydroxyphenyl)-1λ⁴-chromen-1-ylium

Reviewed

Last reviewed on 2024-06-28.

Cite this Page

Pelargonidin 3-sophoroside. 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China. https://biocad_registry.innovation.ac.cn/s/(-)-arctiin (retrieved 2026-01-03) (CAD Registry RN: BioCAD00000030664). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

Note

Pelargonidin 3-sophoroside is found in red raspberry. Pelargonidin 3-sophoroside is isolated from petals of Papaver rhoeas (corn poppy).

Cytoplasm Extracellular
Entity Information

DBLinks

Other DBLinks
  • CAS Registry Number: 54542-60-8
  • PubChem: 131751477
  • HMDB: HMDB0033679
  • KEGG: C16305
  • Metlin: METLIN_46785
  • Metlin: METLIN_64250
  • Coconut NaturalProduct: CNP0568262.1

Class / Ontology

Metabolic Network
ID EC Number Name
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Organism Source

Taxonomy Source

  1. Rubus idaeus [ncbi taxid: 32247]

Pathway Synthetic

pathway id name
PlantCyc:CACUMINATA_PWY-5286 anthocyanidin sophoroside metabolism
PlantCyc:POTATO_PWY-5125 anthocyanin biosynthesis
PlantCyc:COCOA_PWY-5286 anthocyanidin sophoroside metabolism
PlantCyc:OBARTHII_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:OILSEEDRAPE_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:FLAX_PWY-5286 anthocyanidin sophoroside metabolism
PlantCyc:GRAPE_PWY-5125 anthocyanin biosynthesis
PlantCyc:LETTUCE_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:MTRUNCATULA_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:OEUROPAEA_SYLVESTRIS_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:ORYZA_PWY-5125 anthocyanin biosynthesis
PlantCyc:PAXILLARIS_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:POTATO_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:QUINOA_PWY-5286 anthocyanidin sophoroside metabolism
PlantCyc:SPIRODELA_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:AMBORELLA_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:WHEATD_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:CACUMINATA_PWY-5312 superpathway of anthocyanin biosynthesis (from pelargonidin 3-O-glucoside)
PlantCyc:CACUMINATA_PWY-5125 anthocyanin biosynthesis
PlantCyc:RUBBERTREE_PWY-5125 anthocyanin biosynthesis
View All Pathways