Metabolism of vitamins and cofactors

Metabolites

5'-Deoxyadenosine

Formula: C10H13N5O3 (251.10183480000003)

CAS ID: 4754-39-6

6-Pyruvoyltetrahydropterin

Formula: C9H11N5O3 (237.0861856)

CAS ID: 89687-39-8

alpha-Tocopherol

Formula: C29H50O2 (430.38106)

CAS ID: 59-02-9

beta-Carotene

Formula: C40H56 (536.4381776)

CAS ID: 7235-40-7

beta-Ionone

Formula: C13H20O (192.151407)

CAS ID: 79-77-6

Biotin

Formula: C10H16N2O3S (244.08815859999999)

CAS ID: 58-85-5

Calcium cation

Formula: Ca (39.962591)

CAS ID: 14127-61-8

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Hydrogen peroxide

Formula: H2O2 (34.0054792)

CAS ID: 7722-84-1

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

Manganese(2+)

Formula: Mn (54.938046)

CAS ID: 7439-96-5

Menadione

Formula: C11H8O2 (172.0524268)

CAS ID: 58-27-5

Molybdopterin

Formula: C10H14N5O6PS2 (395.01231140000004)

CAS ID: 220399-50-8

Nicotinamide-beta-riboside

Formula: C11H15N2O5 (255.098092)

CAS ID: 1341-23-7

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Pyridoxal

Formula: C8H9NO3 (167.0582404)

CAS ID: 66-72-8

Pyridoxamine

Formula: C8H12N2O2 (168.0898732)

CAS ID: 85-87-0

Pyridoxine

Formula: C8H11NO3 (169.0738896)

CAS ID: 65-23-6

Pyridoxine phosphate

Formula: C8H12NO6P (249.0402222)

CAS ID: 447-05-2

Retinal

Formula: C20H28O (284.2140038)

CAS ID: 116-31-4

Retinol

Formula: C20H30O (286.229653)

CAS ID: 68-26-8

Retinyl palmitate

Formula: C36H60O2 (524.459306)

CAS ID: 79-81-2

Sodium cation

Formula: Na (22.98977)

CAS ID: 17341-25-2

Thiamine

Formula: C12H17N4OS (265.1123012)

CAS ID: 70-16-6

Urate

Formula: C5H4N4O3 (168.0283394)

CAS ID: 69-93-2

Zinc cation

Formula: Zn (63.929145)

CAS ID: 23713-49-7

Ubiquinol-10

Formula: C59H92O4 (864.6995231999999)

CAS ID: 5677-55-4

Menatetrenone

Formula: C31H40O2 (444.302814)

CAS ID: 863-61-6

formate

Formula: CHO2 (44.997654600000004)

CAS ID: 71-47-6

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

hexadecanoate

Formula: C16H31O2 (255.2323926)

CAS ID: 143-20-4

4-hydroxybenzoate

Formula: C7H5O3 (137.023868)

CAS ID: 456-23-5

nicotinate

Formula: C6H4NO2 (122.0242024)

CAS ID:

citrate(3-)

Formula: C6H5O7 (189.00352800000002)

CAS ID: 126-44-3

molybdate

Formula: MoO4 (161.885065)

CAS ID: 14259-85-9

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

GTP(4-)

Formula: C10H12N5O14P3 (518.9593642)

CAS ID: 86527-72-2

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8

L-lysinium(1+)

Formula: C6H15N2O2 (147.113347)

CAS ID: 56-87-1



Enzyme

EC Number name full name note
2.5.1.-
1.13.11.65 carotenoid isomerooxygenase zeaxanthin:oxygen 15,15'-oxidoreductase (bond-cleaving, cis-isomerizing)
1.14.13.39 nitric-oxide synthase (NADPH) L-arginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming)
1.14.15.45 4-hydroxy-3-polyprenylbenzoate 5-hydroxylase 4-hydroxy-3-all-trans-polyprenylbenzoate,ferredoxin:oxygen oxidoreductase (5-hydroxylating)
1.14.15.46 2-methoxy-6-polyprenylphenol 4-hydroxylase 2-methoxy-6-(all-trans-polyprenyl)phenol,ferredoxin:oxygen oxidoreductase (4-hydroxylating)
1.17.1.4 xanthine dehydrogenase xanthine:NAD+ oxidoreductase
1.5.1.15 methylenetetrahydrofolate dehydrogenase (NAD+) 5,10-methylenetetrahydrofolate:NAD+ oxidoreductase
1.5.1.3 dihydrofolate reductase 5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase
1.5.1.5 methylenetetrahydrofolate dehydrogenase (NADP+) 5,10-methylenetetrahydrofolate:NADP+ oxidoreductase
1.5.4.1 pyrimidodiazepine synthase 2-amino-6-acetyl-3,7,8,9-tetrahydro-3H-pyrimido[4,5-b][1,4]diazepin-4-one:glutathione-disulfide oxidoreductase (ring-opening, cyclizing)
2.1.1.201 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase S-adenosyl-L-methionine:2-methoxy-6-all-trans-polyprenyl-1,4-benzoquinol 5-C-methyltransferase
2.10.1.1 molybdopterin molybdotransferase adenylyl-molybdopterin:molybdate molybdate transferase (AMP-forming)
2.5.1.39 4-hydroxybenzoate polyprenyltransferase polyprenyl-diphosphate:4-hydroxybenzoate polyprenyltransferase
2.7.1.26 riboflavin kinase ATP:riboflavin 5'-phosphotransferase
2.7.11.1 non-specific serine/threonine protein kinase ATP:protein phosphotransferase (non-specific)
2.7.11.12 cGMP-dependent protein kinase ATP:protein phosphotransferase (cGMP-dependent)
2.7.7.1 nicotinamide-nucleotide adenylyltransferase ATP:nicotinamide-nucleotide adenylyltransferase
2.7.7.18 nicotinate-nucleotide adenylyltransferase ATP:nicotinate-ribonucleotide adenylyltransferase
2.7.7.75 molybdopterin adenylyltransferase ATP:molybdopterin adenylyltransferase
2.7.7.80 molybdopterin-synthase adenylyltransferase ATP:molybdopterin-synthase adenylyltransferase
2.8.1.11 molybdopterin synthase sulfurtransferase [cysteine desulfurase]-S-sulfanyl-L-cysteine:[molybdopterin-synthase sulfur-carrier protein]-Gly-Gly sulfurtransferase
2.8.1.7 cysteine desulfurase L-cysteine:acceptor sulfurtransferase
2.8.1.9 molybdenum cofactor sulfurtransferase L-cysteine:molybdenum cofactor sulfurtransferase
3.5.4.16 GTP cyclohydrolase I GTP 7,8-8,9-dihydrolase
3.5.4.9 methenyltetrahydrofolate cyclohydrolase 5,10-methenyltetrahydrofolate 5-hydrolase (decyclizing)
4.1.1.130 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase 4-hydroxy-3-methoxy-5-all-trans-polyprenylbenzoate carboxy-lyase
4.1.99.22 GTP 3',8-cyclase GTP 3',8-cyclase [(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate-forming]
4.2.1.93 ATP-dependent NAD(P)H-hydrate dehydratase (6S)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase (ATP-hydrolysing; NADH-forming)
4.2.3.12 6-pyruvoyltetrahydropterin synthase 7,8-dihydroneopterin 3'-triphosphate triphosphate-lyase (6-pyruvoyl-5,6,7,8-tetrahydropterin-forming)
4.6.1.17 cyclic pyranopterin monophosphate synthase (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate lyase (cyclic pyranopterin phosphate-forming)
5.1.99.6 NAD(P)H-hydrate epimerase (6R)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide 6-epimerase
6.3.4.21 nicotinate phosphoribosyltransferase 5-phospho-alpha-D-ribose 1-diphosphate:nicotinate ligase (ADP, diphosphate-forming)
6.3.4.3 formate-tetrahydrofolate ligase formate:tetrahydrofolate ligase (ADP-forming)
6.3.5.1 NAD+ synthase (glutamine-hydrolysing) deamido-NAD+:L-glutamine amido-ligase (AMP-forming)
6.4.1.4 methylcrotonoyl-CoA carboxylase 3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)


Proteins

Protein ID name full name