ADP(3-) (BioCAD00000476655)
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Metabolite Card
Formula: C10H12N5O10P2 (424.0059)
SMILES: Nc1ncnc2n(cnc12)[C@@H]1O[C@H](COP([O-])(=O)OP([O-])([O-])=O)[C@@H](O)[C@H]1O
Synonyms [en]
adenosine-diphosphate; ADP(3-); ADP; ADP trianion; adenosine-5-diphosphate; 5'-O-[(phosphonatooxy)phosphinato]adenosine
Last reviewed on 2024-06-28.
Cite this Page
ADP(3-). 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/(-)-arctiin
(retrieved
2026-01-03) (CAD Registry RN: BioCAD00000476655). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
A nucleoside 5'-diphosphate(3-) arising from deprotonation of all three diphosphate OH groups of adenosine 5'-diphosphate (ADP); major species present at pH 7.3." []
| ID | EC Number | Name |
|---|---|---|
| BioCyc:FORMATETHFLIG-RXN | 6.3.4.3 | THF-GLU-N + ATP + FORMATE --> FORMYL-THF-GLU-N + ADP + Pi |
| BioCyc:BIOTIN-CARBOXYL-RXN | 6.3.4.14 | biotin-L-lysine-in-BCCP-dimers + HCO3 + ATP --> Pi + carboxybiotin-L-lysine-in-BCCP-dimers + ADP + PROTON |
| BioCyc:THI-P-KIN-RXN | 2.7.4.16 | THIAMINE-P + ATP --> THIAMINE-PYROPHOSPHATE + ADP |
| BioCyc:RXN-18510 | 2.7.1.26 | CPD-19833 + ATP --> CPD-19839 + ADP + PROTON |
| BioCyc:GLYRIBONUCSYN-RXN | 6.3.4.13 | 5-P-BETA-D-RIBOSYL-AMINE + ATP + GLY --> PROTON + ADP + Pi + 5-PHOSPHO-RIBOSYL-GLYCINEAMIDE |
| BioCyc:ATPSYN-RXN | 7.1.2.2 | ATP + WATER + 3 PROTON<=>ADP + Pi + 4 PROTON |
| BioCyc:PROTEIN-KINASE-RXN | 2.7.12.1 | ATP + Protein-L-serine-or-L-threonine --> ADP + Protein-Ser-or-Thr-phosphate + PROTON |
| BioCyc:OHMETPYRKIN-RXN | 2.7.1.49 | ATP + HMP --> PROTON + ADP + AMINO-HYDROXYMETHYL-METHYL-PYR-P |
| BioCyc:5.99.1.3-RXN | 5.6.2.2 | Double-Stranded-DNAs + ATP --> Negatively-super-coiled-DNAs + ADP + Pi |
| BioCyc:DURIDKI-RXN | 2.7.1.145 | DEOXYURIDINE + ATP --> PROTON + DUMP + ADP |
| BioCyc:CTPSYN-RXN | 6.3.4.2 | ATP + UTP + GLN + WATER --> 2 PROTON + ADP + Pi + CTP + GLT |
| BioCyc:URIDINEKIN-RXN | 2.7.1.48 | URIDINE + ATP --> PROTON + UMP + ADP |
| BioCyc:CYTIKIN-RXN | 2.7.1.48 | CYTIDINE + ATP --> CMP + ADP + PROTON |
| BioCyc:RXN1G-4355 | 6.4.1.3 | ATP + CPD1G-277 + HCO3 --> CPD1G-332 + ADP + Pi + PROTON |
| BioCyc:NICOTINATEPRIBOSYLTRANS-RXN | 6.3.4.21 | NIACINE + PRPP + ATP + WATER --> NICOTINATE_NUCLEOTIDE + PPI + ADP + Pi |
| BioCyc:TRANS-RXN2B79-155 | 7.4.2.2 | Branched-Amino-Acids + ATP + WATER --> Branched-Amino-Acids + ADP + Pi + PROTON |
| BioCyc:GLUCOKIN-RXN | 2.7.1.1 | Glucopyranose + ATP --> D-glucopyranose-6-phosphate + ADP + PROTON |
| BioCyc:RXN-16909 | HCO3 + ATP --> CPD-18238 + ADP | |
| BioCyc:ABC-14-RXN | 7.4.2.1 | ATP + HIS + WATER --> ADP + Pi + HIS + PROTON |
| BioCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN | 6.3.3.2 | N5-Formyl-THF-Glu-N + ATP --> 5-10-METHENYL-THF-GLU-N + ADP + Pi |
Taxonomy Source
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:HUMAN_PWY-6138 | CMP-N-acetylneuraminate biosynthesis I (eukaryotes) |
| BioCyc:HUMAN_PWY-6121 | 5-aminoimidazole ribonucleotide biosynthesis |
| BioCyc:HUMAN_PWY-6938 | NADH repair |
| BioCyc:HUMAN_NADPHOS-DEPHOS-PWY-1 | NAD phosphorylation and dephosphorylation |
| BioCyc:HUMAN_PWY-4984 | urea cycle |
| BioCyc:HUMAN_PWY3DJ-11470 | sphingosine and sphingosine-1-phosphate metabolism |
| BioCyc:HUMAN_PWY-4261 | glycerol degradation |
| BioCyc:HUMAN_PWY0-1264 | biotin-carboxyl carrier protein assembly |
| BioCyc:HUMAN_PWY-6124 | inosine-5'-phosphate biosynthesis |
| BioCyc:HUMAN_PWY-5661-1 | GDP-glucose biosynthesis II |
| BioCyc:HUMAN_PWY-7224 | purine deoxyribonucleosides salvage |
| BioCyc:HUMAN_PROSYN-PWY | proline biosynthesis |
| BioCyc:HUMAN_PWY-6517 | N-acetylglucosamine degradation II |
| BioCyc:HUMAN_PWY-2161 | folate polyglutamylation |
| BioCyc:HUMAN_PWY66-400 | glycolysis |
| BioCyc:HUMAN_PWY-6352 | 3-phosphoinositide biosynthesis |
| BioCyc:HUMAN_PWY-7193 | pyrimidine ribonucleosides salvage I |
| BioCyc:HUMAN_PWY-6369 | inositol pyrophosphates biosynthesis |
| BioCyc:HUMAN_PWY-6366 | D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis |
| BioCyc:HUMAN_PWY-5328 | superpathway of methionine degradation |