isopentenyl diphosphate(3-) (BioCAD00000476622)
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Metabolite Card
Formula: C5H9O7P2 (242.9824)
SMILES: CC(=C)CCOP([O-])(=O)OP([O-])([O-])=O
Synonyms [en]
3-methylbut-3-enyl pyrophosphate; 3-methylbut-3-enyl diphosphate; 3-methylbut-3-en-1-yl diphosphate; isopentenyl pyrophosphate; isopentenyl-pp; isopentenyl diphosphate
Last reviewed on 2024-06-28.
Cite this Page
isopentenyl diphosphate(3-). 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/(-)-arctiin
(retrieved
2026-01-03) (CAD Registry RN: BioCAD00000476622). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
An organophosphate oxoanion that is the trianion of isopentenyl diphosphate arising from deprotonation of the three OH groups of the diphosphate." []
DBLinks
- CAS Registry Number:
- PubChem CID: 15983957
- ChEBI: 128769
- HMDB:
- LipidMaps:
- KEGG:
- BioCyc: DELTA3-ISOPENTENYL-PP
- NCBI MeSH:
- Wikipedia:
Other DBLinks
- PubChem: 15983957
- ChEBI: ChEBI:128769
- BioCyc: DELTA3-ISOPENTENYL-PP
Class / Ontology
| ID | EC Number | Name |
|---|---|---|
| BioCyc:ISPH2-RXN | 1.17.7.4 | HYDROXY-METHYL-BUTENYL-DIP + 2 Reduced-ferredoxins + 2 PROTON --> DELTA3-ISOPENTENYL-PP + 2 Oxidized-ferredoxins + WATER |
| BioCyc:IPPISOM-RXN | 5.3.3.2 | DELTA3-ISOPENTENYL-PP<=>CPD-4211 |
| BioCyc:RXN-8999 | 2.5.1.31 | FARNESYL-PP + 8 DELTA3-ISOPENTENYL-PP --> UNDECAPRENYL-DIPHOSPHATE + 8 PPI |
| BioCyc:FPPSYN-RXN | 2.5.1.10 | GERANYL-PP + DELTA3-ISOPENTENYL-PP --> FARNESYL-PP + PPI |
| BioCyc:GPPSYN-RXN | 2.5.1.1 | CPD-4211 + DELTA3-ISOPENTENYL-PP --> GERANYL-PP + PPI |
| BioCyc:RXN-24044 | 1.17.7.4 | HYDROXY-METHYL-BUTENYL-DIP + Reduced-flavodoxins --> DELTA3-ISOPENTENYL-PP + Oxidized-flavodoxins + WATER |
| BioCyc:RXN-8992 | 2.5.1.90 | FARNESYL-PP + 5 DELTA3-ISOPENTENYL-PP --> OCTAPRENYL-DIPHOSPHATE + 5 PPI |
| Rhea:RHEA:11329 | 2.5.1.28 | isopentenyl diphosphate + dimethylallyl diphosphate => neryl diphosphate + diphosphate |
| Rhea:RHEA:11330 | 2.5.1.28 | neryl diphosphate + diphosphate => isopentenyl diphosphate + dimethylallyl diphosphate |
| Rhea:RHEA:11331 | 2.5.1.28 | isopentenyl diphosphate + dimethylallyl diphosphate <=> neryl diphosphate + diphosphate |
| Rhea:RHEA:17654 | 2.5.1.29 | isopentenyl diphosphate + (2E,6E)-farnesyl diphosphate => (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate |
| Rhea:RHEA:17655 | 2.5.1.29 | (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate => isopentenyl diphosphate + (2E,6E)-farnesyl diphosphate |
| Rhea:RHEA:17656 | 2.5.1.29 | isopentenyl diphosphate + (2E,6E)-farnesyl diphosphate <=> (2E,6E,10E)-geranylgeranyl diphosphate + diphosphate |
| Rhea:RHEA:18802 | 2.5.1.20 | (cis-prenyl)(n)-diphosphate + isopentenyl diphosphate => (cis-prenyl)(n+1)-diphosphate + diphosphate |
| Rhea:RHEA:18803 | 2.5.1.20 | (cis-prenyl)(n+1)-diphosphate + diphosphate => (cis-prenyl)(n)-diphosphate + isopentenyl diphosphate |
| Rhea:RHEA:18804 | 2.5.1.20 | (cis-prenyl)(n)-diphosphate + isopentenyl diphosphate <=> (cis-prenyl)(n+1)-diphosphate + diphosphate |
| Rhea:RHEA:19362 | 2.5.1.10 | isopentenyl diphosphate + (2E)-geranyl diphosphate => (2E,6E)-farnesyl diphosphate + diphosphate |
| Rhea:RHEA:19363 | 2.5.1.10 | (2E,6E)-farnesyl diphosphate + diphosphate => isopentenyl diphosphate + (2E)-geranyl diphosphate |
| Rhea:RHEA:19364 | 2.5.1.10 | isopentenyl diphosphate + (2E)-geranyl diphosphate <=> (2E,6E)-farnesyl diphosphate + diphosphate |
| Rhea:RHEA:22409 | 2.5.1.1 | isopentenyl diphosphate + dimethylallyl diphosphate => (2E)-geranyl diphosphate + diphosphate |
Taxonomy Source
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:HUMAN_PWY-5120 | geranylgeranyldiphosphate biosynthesis |
| BioCyc:META_HEXPPSYN-PWY | hexaprenyl diphosphate biosynthesis |
| BioCyc:META_PWY-5807 | heptaprenyl diphosphate biosynthesis |
| BioCyc:META_PWY-6520 | nonaprenyl diphosphate biosynthesis II |
| BioCyc:META_PWY-6859 | all-trans-farnesol biosynthesis |
| BioCyc:META_PWY-7141 | (3S)-linalool biosynthesis |
| BioCyc:META_PWY-7102 | bisabolene biosynthesis (engineered) |
| BioCyc:META_PWY2OL-4 | superpathway of linalool biosynthesis |
| BioCyc:META_PWY-7182 | linalool biosynthesis I |
| BioCyc:META_PWY-7392 | taxadiene biosynthesis (engineered) |
| BioCyc:META_PWY-7517 | brassicicene C biosynthesis |
| BioCyc:META_PWY-922 | mevalonate pathway I |
| BioCyc:META_PWY-7156 | superpathway of ergosterol biosynthesis II |
| BioCyc:META_PWY-6263 | superpathway of menaquinol-8 biosynthesis II |
| BioCyc:META_PWY-7992 | superpathway of menaquinol-8 biosynthesis III |
| BioCyc:META_PWY-5898 | superpathway of menaquinol-12 biosynthesis |
| BioCyc:META_PWY-5845 | superpathway of menaquinol-9 biosynthesis |
| BioCyc:META_PWY-5864 | superpathway of plastoquinol biosynthesis |
| BioCyc:META_ALL-CHORISMATE-PWY | superpathway of chorismate metabolism |
| BioCyc:META_PWY-5856 | ubiquinol-9 biosynthesis (prokaryotic) |