Post-translational protein modification

Metabolites

1,3-Diaminopropane

Formula: C3H10N2 (74.084394)

CAS ID: 109-76-2

5'-Deoxyadenosine

Formula: C10H13N5O3 (251.10183480000003)

CAS ID: 4754-39-6

5'-Methylthioadenosine

Formula: C11H15N5O3S (297.089556)

CAS ID: 2457-80-9

Acetate

Formula: C2H4O2 (60.0211284)

CAS ID: 64-19-7

alpha-L-Fucopyranose

Formula: C6H12O5 (164.06847019999998)

CAS ID: 6696-41-9

beta-L-Fucopyranose

Formula: C6H12O5 (164.06847019999998)

CAS ID: 13224-93-6

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

D-Glucose

Formula: C6H12O6 (180.0633852)

CAS ID: 50-99-7

D-Mannose

Formula: C6H12O6 (180.0633852)

CAS ID: 3458-28-4

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

Fe3+

Formula: Fe (55.934939)

CAS ID: 7439-89-6

Geranylgeranyl diphosphate

Formula: C20H36O7P2 (450.1936166)

CAS ID: 6699-20-3

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

Manganese(2+)

Formula: Mn (54.938046)

CAS ID: 7439-96-5

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Rifampicin

Formula: C43H58N4O12 (822.4051028)

CAS ID: 13292-46-1

Zinc cation

Formula: Zn (63.929145)

CAS ID: 23713-49-7

Menatetrenone

Formula: C31H40O2 (444.302814)

CAS ID: 863-61-6

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

succinate(2-)

Formula: C4H4O4 (116.01095839999999)

CAS ID: 56-14-4

pyruvate

Formula: C3H3O3 (87.00821880000001)

CAS ID: 57-60-3

cholate

Formula: C24H39O5 (407.2797344)

CAS ID: 298-43-1

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

GTP(4-)

Formula: C10H12N5O14P3 (518.9593642)

CAS ID: 86527-72-2

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

UDP(3-)

Formula: C9H11N2O12P2 (400.9787246)

CAS ID: 86527-70-0

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8

L-lysinium(1+)

Formula: C6H15N2O2 (147.113347)

CAS ID: 56-87-1

hydrosulfide

Formula: HS (32.979896600000004)

CAS ID: 15035-72-0



Enzyme

EC Number name full name note
1.14.11.-
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase [histone H3]-N6,N6-dimethyl-L-lysine36,2-oxoglutarate:oxygen oxidoreductase
1.14.11.73 [protein]-arginine 3-hydroxylase [protein]-L-arginine,2-oxoglutarate:oxygen oxidoreductase (3R-hydroxylating)
1.14.11.79 protein-L-histidine (3S)-3-hydroxylase protein-L-histidine,2-oxoglutarate:oxygen oxidoreductase (3S-hydroxylating)
1.14.99.29 deoxyhypusine monooxygenase deoxyhypusine,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)
1.8.3.7 formylglycine-generating enzyme [sulfatase]-L-cysteine:oxygen oxidoreductase (3-oxo-L-alanine-forming)
2.1.1.314 diphthine methyl ester synthase S-adenosyl-L-methionine:2-[(3S)-3-carboxy-3-aminopropyl]-L-histidine-[translation elongation factor 2] methyltransferase (diphthine methyl ester-[translation elongation factor 2]-forming)
2.3.1.200 lipoyl amidotransferase [glycine cleavage system H]-N6-lipoyl-L-lysine:[lipoyl-carrier protein]-N6-L-lysine lipoyltransferase
2.3.2.23 E2 ubiquitin-conjugating enzyme S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine:[E2 ubiquitin-conjugating enzyme] ubiquitinyl transferase
2.3.2.27 RING-type E3 ubiquitin transferase [E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine:[acceptor protein] ubiquitin transferase (isopeptide bond-forming; RING-type)
2.3.2.34 E2 NEDD8-conjugating enzyme [E1 NEDD8-activating enzyme]-S-[NEDD8 protein]-yl-L-cysteine:[E2 NEDD8-conjugating enzyme] [NEDD8-protein]-yl transferase
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase UDP-N-acetyl-alpha-D-glucosamine:O3-[beta-D-galactosyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-glycoprotein 6-beta-N-acetyl-D-glucosaminyltransferase (configuration-inverting)
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase UDP-alpha-D-galactose:N-acetyl-alpha-D-galactosaminyl-R beta-1,3-galactosyltransferase (configuration-inverting)
2.4.1.148 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase UDP-N-acetyl-D-glucosamine:N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-D-galactosaminyl-R 6-beta-N-acetyl-D-glucosaminyltransferase
2.4.1.150 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase UDP-N-acetyl-alpha-D-glucosamine:beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminide 6-beta-N-acetylglucosaminyltransferase (configuration-inverting)
2.4.1.312 protein O-mannose beta-1,4-N-acetylglucosaminyltransferase UDP-N-acetyl-alpha-D-glucosamine:alpha-D-mannosyl-threonyl-[protein] 4-beta-N-acetyl-D-glucosaminyltransferase
2.5.1.46 deoxyhypusine synthase [eIF5A-precursor]-lysine:spermidine 4-aminobutyltransferase (propane-1,3-diamine-forming)
2.5.1.60 protein geranylgeranyltransferase type II geranylgeranyl-diphosphate:protein-cysteine geranyltransferase
2.7.1.108 dolichol kinase CTP:dolichol O-phosphotransferase
2.7.10.2 non-specific protein-tyrosine kinase ATP:[protein]-L-tyrosine O-phosphotransferase (non-specific)
2.7.11.1 non-specific serine/threonine protein kinase ATP:protein phosphotransferase (non-specific)
2.7.11.22 cyclin-dependent kinase ATP:cyclin phosphotransferase
2.7.11.23 [RNA-polymerase]-subunit kinase ATP:[DNA-directed RNA polymerase] phosphotransferase
2.7.11.25 mitogen-activated protein kinase kinase kinase ATP:protein phosphotransferase (MAPKKKK-activated)
2.7.11.26 tau-protein kinase ATP:[tau-protein] O-phosphotransferase
2.7.7.43 N-acylneuraminate cytidylyltransferase CTP:N-acylneuraminate cytidylyltransferase
2.7.7.7 DNA-directed DNA polymerase deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
2.8.1.8 lipoyl synthase [protein]-N6-(octanoyl)-L-lysine:an [Fe-S] cluster scaffold protein carrying a [4Fe-4S]2+ cluster sulfurtransferase
3.2.1.18 exo-alpha-sialidase acetylneuraminyl hydrolase
3.2.1.51 alpha-L-fucosidase alpha-L-fucoside fucohydrolase
3.4.19.12 ubiquitinyl hydrolase 1
3.4.21.21 coagulation factor VIIa
3.4.25.1 proteasome endopeptidase complex
3.5.1.124 protein deglycase a [protein]-L-amino acid-1-hydroxypropan-2-one hydrolase [(R)-lactate-forming]
3.5.1.25 N-acetylglucosamine-6-phosphate deacetylase N-acetyl-D-glucosamine-6-phosphate amidohydrolase
3.5.1.89 N-acetylglucosaminylphosphatidylinositol deacetylase 6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol acetylhydrolase
3.5.1.98 histone deacetylase histone amidohydrolase
3.6.1.45 UDP-sugar diphosphatase UDP-sugar sugarphosphohydrolase
3.6.4.10 non-chaperonin molecular chaperone ATPase ATP phosphohydrolase (polypeptide-polymerizing)
3.6.5.2 small monomeric GTPase GTP phosphohydrolase (cell-regulating)
4.1.1.33 diphosphomevalonate decarboxylase ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP; isopentenyl-diphosphate-forming)
4.1.1.90 peptidyl-glutamate 4-carboxylase peptidyl-glutamate 4-carboxylase (2-methyl-3-phytyl-1,4-naphthoquinone-epoxidizing)
4.1.3.3 N-acetylneuraminate lyase aceneuramate pyruvate-lyase (N-acetyl-D-mannosamine-forming)
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase
5.3.1.8 mannose-6-phosphate isomerase D-mannose-6-phosphate aldose-ketose-isomerase
6.2.1.45 E1 ubiquitin-activating enzyme ubiquitin:[E1 ubiquitin-activating enzyme] ligase (AMP-forming)
6.3.1.14 diphthine-ammonia ligase diphthine-[translation elongation factor 2]:ammonia ligase (AMP-forming)


Proteins

Protein ID name full name