Lysine Metabolism

Metabolites

(E)-Glutaconate

Formula: C5H6O4 (130.0266076)

CAS ID: 628-48-8

2-Hydroxyglutarate

Formula: C5H8O5 (148.0371718)

CAS ID: 2889-31-8

2-Oxoadipate

Formula: C6H8O5 (160.0371718)

CAS ID: 3184-35-8

2-Oxoglutarate

Formula: C5H6O5 (146.0215226)

CAS ID: 328-50-7

Acetyl-CoA

Formula: C23H38N7O17P3S (809.1257688000001)

CAS ID: 72-89-9

ADP

Formula: C10H15N5O10P2 (427.02941500000003)

CAS ID: 58-64-0

ATP

Formula: C10H16N5O13P3 (506.9957476)

CAS ID: 56-65-5

Cadaverine

Formula: C5H14N2 (102.1156924)

CAS ID: 462-94-2

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

Glutarate

Formula: C5H8O4 (132.0422568)

CAS ID: 110-94-1

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

L-Aspartate 4-semialdehyde

Formula: C4H7NO3 (117.0425912)

CAS ID: 2338-03-6

L-Glutamate

Formula: C5H9NO4 (147.0531554)

CAS ID: 56-86-0

L-Lysine

Formula: C6H14N2O2 (146.1055224)

CAS ID: 56-87-1

NAD+

Formula: C21H28N7O14P2 (664.1169428000001)

CAS ID: 53-84-9

NADH

Formula: C21H29N7O14P2 (665.1247674)

CAS ID: 58-68-4

NADP+

Formula: C21H29N7O17P3 (744.0832754)

CAS ID: 53-59-8

Pyruvate

Formula: C3H4O3 (88.0160434)

CAS ID: 127-17-3

phosphate(3-)

Formula: O4P (94.953423)

CAS ID: 14265-44-2



Enzyme

EC Number name full name note
1.1.1.3 homoserine dehydrogenase L-homoserine:NAD(P)+ oxidoreductase
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase (S)-3-hydroxyacyl-CoA:NAD+ oxidoreductase
1.1.99.39 D-2-hydroxyglutarate dehydrogenase (R)-2-hydroxyglutarate:acceptor 2-oxidoreductase
1.17.1.8 4-hydroxy-tetrahydrodipicolinate reductase (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate:NAD(P)+ 4-oxidoreductase
1.5.1.8 saccharopine dehydrogenase (NADP+, L-lysine-forming) N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-lysine-forming)
1.5.1.9 saccharopine dehydrogenase (NAD+, L-glutamate-forming) N6-(L-1,3-dicarboxypropyl)-L-lysine:NAD+ oxidoreductase (L-glutamate-forming)
2.3.1.9 acetyl-CoA C-acetyltransferase acetyl-CoA:acetyl-CoA C-acetyltransferase
2.6.1.83 LL-diaminopimelate aminotransferase LL-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase
2.7.2.4 aspartate kinase ATP:L-aspartate 4-phosphotransferase
4.1.1.20 diaminopimelate decarboxylase meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming)
4.1.1.50 adenosylmethionine decarboxylase S-adenosyl-L-methionine carboxy-lyase [(5-deoxy-5-adenosyl)(3-aminopropyl)methylsulfonium-salt-forming]
4.2.1.119 enoyl-CoA hydratase 2 (3R)-3-hydroxyacyl-CoA hydro-lyase
4.2.1.17 enoyl-CoA hydratase (3S)-3-hydroxyacyl-CoA hydro-lyase
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (4S)-4-hydroxy-2,3,4,5-tetrahydro-(2S)-dipicolinate-forming]
5.1.1.7 diaminopimelate epimerase LL-2,6-diaminoheptanedioate 2-epimerase
5.1.2.3 3-hydroxybutyryl-CoA epimerase 3-hydroxybutanoyl-CoA 3-epimerase
5.3.3.8 DELTA3-DELTA2-enoyl-CoA isomerase (3Z/3E)-alk-3-enoyl-CoA (2E)-isomerase


Proteins

Protein ID name full name