superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass

Metabolites

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Ubiquinone-1

Formula: C14H18O4 (250.1205028)

CAS ID: 727-81-1

QH(2)

Formula: C14H20O4 (252.136152)

CAS ID: 52590-98-4

oxaloacetate(2-)

Formula: C4H2O5 (129.9902242)

CAS ID: 149-63-3

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

succinate(2-)

Formula: C4H4O4 (116.01095839999999)

CAS ID: 56-14-4

butenedioate

Formula: C4H2O4 (113.99530920000001)

CAS ID: 17013-01-3

pyruvate

Formula: C3H3O3 (87.00821880000001)

CAS ID: 57-60-3

glyoxylate

Formula: C2HO3 (72.9925696)

CAS ID:

citrate(3-)

Formula: C6H5O7 (189.00352800000002)

CAS ID: 126-44-3

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8



Enzyme

EC Number name full name note
5.4.2.-
1.1.1.37 malate dehydrogenase (S)-malate:NAD+ oxidoreductase
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) D-glyceraldehyde-3-phosphate:NAD+ oxidoreductase (phosphorylating)
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring) pyruvate:[dihydrolipoyllysine-residue acetyltransferase]-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating)
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring) 2-oxoglutarate:[dihydrolipoyllysine-residue succinyltransferase]-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-succinylating)
1.3.5.1 succinate dehydrogenase succinate:quinone oxidoreductase
1.8.1.4 dihydrolipoyl dehydrogenase protein-N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase succinyl-CoA:enzyme-N6-(dihydrolipoyl)lysine S-succinyltransferase
2.7.1.11 6-phosphofructokinase ATP:D-fructose-6-phosphate 1-phosphotransferase
2.7.1.40 pyruvate kinase ATP:pyruvate 2-O-phosphotransferase
2.7.2.3 phosphoglycerate kinase ATP:3-phospho-D-glycerate 1-phosphotransferase
3.1.3.11 fructose-bisphosphatase D-fructose-1,6-bisphosphate 1-phosphohydrolase
4.1.2.57 sulfofructosephosphate aldolase 6-deoxy-6-sulfofructose-1-phosphate (2S)-3-sulfolactaldehyde-lyase (glycerone-phosphate-forming)
4.2.1.11 phosphopyruvate hydratase 2-phospho-D-glycerate hydro-lyase (phosphoenolpyruvate-forming)
4.2.1.2 fumarate hydratase (S)-malate hydro-lyase (fumarate-forming)
5.3.1.1 triose-phosphate isomerase D-glyceraldehyde-3-phosphate aldose-ketose-isomerase
5.3.1.9 glucose-6-phosphate isomerase alpha-D-glucose-6-phosphate aldose-ketose-isomerase (configuration-inverting)
5.3.2.2 oxaloacetate tautomerase oxaloacetate keto---enol-isomerase
5.4.2.11 phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) D-phosphoglycerate 2,3-phosphomutase (2,3-diphosphoglycerate-dependent)
6.2.1.5 succinate-CoA ligase (ADP-forming) succinate:CoA ligase (ADP-forming)


Proteins

Protein ID name full name
P0A6Q1 eno Enolase
P0A6T2 pgi Glucose-6-phosphate isomerase
P0A797 pfkA ATP-dependent 6-phosphofructokinase isozyme 1
P0A7A3 gpmB Probable phosphoglycerate mutase GpmB
P0A838 sucC Succinate--CoA ligase [ADP-forming] subunit beta
P0A860 tpiA Triosephosphate isomerase
P0A9B4 gapA Glyceraldehyde-3-phosphate dehydrogenase A
P0A9P2 lpdA Dihydrolipoyl dehydrogenase
P0AC43 sdhA Succinate dehydrogenase flavoprotein subunit
P0AD62 pykF Pyruvate kinase I
P0AFG5 sucA 2-oxoglutarate dehydrogenase E1 component
P0AFG7 sucB Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
P0AFG9 aceE Pyruvate dehydrogenase E1 component
P0AGF1 sucD Succinate--CoA ligase [ADP-forming] subunit alpha
P58072 gapC Glyceraldehyde-3-phosphate dehydrogenase C
P61891 mdh Malate dehydrogenase
P62709 gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Q8X4P8 fumA Fumarate hydratase class I, aerobic
Q8X769 fumC Fumarate hydratase class II
Q8X8D5 yihT Sulfofructosephosphate aldolase
Q8XCF0 fbp Fructose-1,6-bisphosphatase class 1
Q8XD03 pgk Phosphoglycerate kinase