Post-translational protein modification

Metabolites

1,3-Diaminopropane

Formula: C3H10N2 (74.084394)

CAS ID: 109-76-2

5'-Deoxyadenosine

Formula: C10H13N5O3 (251.10183480000003)

CAS ID: 4754-39-6

5'-Methylthioadenosine

Formula: C11H15N5O3S (297.089556)

CAS ID: 2457-80-9

Acetate

Formula: C2H4O2 (60.0211284)

CAS ID: 64-19-7

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

D-Mannose

Formula: C6H12O6 (180.0633852)

CAS ID: 3458-28-4

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

Fe3+

Formula: Fe (55.934939)

CAS ID: 7439-89-6

Geranylgeranyl diphosphate

Formula: C20H36O7P2 (450.1936166)

CAS ID: 6699-20-3

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Zinc cation

Formula: Zn (63.929145)

CAS ID: 23713-49-7

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

succinate(2-)

Formula: C4H4O4 (116.01095839999999)

CAS ID: 56-14-4

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

GTP(4-)

Formula: C10H12N5O14P3 (518.9593642)

CAS ID: 86527-72-2

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

UDP(3-)

Formula: C9H11N2O12P2 (400.9787246)

CAS ID: 86527-70-0

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8

hydrosulfide

Formula: HS (32.979896600000004)

CAS ID: 15035-72-0



Enzyme

EC Number name full name note
1.-.-.-
1.14.99.29 deoxyhypusine monooxygenase deoxyhypusine,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)
1.3.1.94 polyprenal reductase dolichal:NADP+ 2,3-oxidoreductase
2.1.1.100 protein-S-isoprenylcysteine O-methyltransferase S-adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase
2.1.1.314 diphthine methyl ester synthase S-adenosyl-L-methionine:2-[(3S)-3-carboxy-3-aminopropyl]-L-histidine-[translation elongation factor 2] methyltransferase (diphthine methyl ester-[translation elongation factor 2]-forming)
2.1.1.319 type I protein arginine methyltransferase S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega-dimethyl-L-arginine-forming)
2.3.1.12 dihydrolipoyllysine-residue acetyltransferase acetyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-acetyltransferase
2.3.1.181 lipoyl(octanoyl) transferase octanoyl-[acyl-carrier protein]:protein N-octanoyltransferase
2.3.1.4 glucosamine-phosphate N-acetyltransferase acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase succinyl-CoA:enzyme-N6-(dihydrolipoyl)lysine S-succinyltransferase
2.3.2.27 RING-type E3 ubiquitin transferase [E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine:[acceptor protein] ubiquitin transferase (isopeptide bond-forming; RING-type)
2.4.1.117 dolichyl-phosphate beta-glucosyltransferase UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase
2.4.1.132 GDP-Man:Man1GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase GDP-D-mannose:D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol 3-alpha-mannosyltransferase
2.4.1.142 chitobiosyldiphosphodolichol beta-mannosyltransferase GDP-mannose:chitobiosyldiphosphodolichol beta-D-mannosyltransferase
2.4.1.257 GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase GDP-D-mannose:D-Man-alpha-(1->3)-D-Man-beta-(1-4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-6-mannosyltransferase
2.4.1.258 dolichyl-P-Man:Man5GlcNAc2-PP-dolichol alpha-1,3-mannosyltransferase dolichyl beta-D-mannosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-mannosyltransferase
2.4.1.259 dolichyl-P-Man:Man6GlcNAc2-PP-dolichol alpha-1,2-mannosyltransferase dolichyl beta-D-mannosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->3)-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-mannosyltransferase
2.4.1.260 dolichyl-P-Man:Man7GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase dolichyl beta-D-mannosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,6-mannosyltransferase
2.4.1.261 dolichyl-P-Man:Man8GlcNAc2-PP-dolichol alpha-1,2-mannosyltransferase dolichyl beta-D-mannosyl phosphate:D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-mannosyltransferase
2.4.1.265 dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichol alpha-1,3-glucosyltransferase dolichyl beta-D-glucosyl phosphate: D-Glc-alpha-(1->3)-D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-mannosyltransferase
2.4.1.267 dolichyl-P-Glc:Man9GlcNAc2-PP-dolichol alpha-1,3-glucosyltransferase dolichyl beta-D-glucosyl phosphate: D-Man-alpha-(1->2)-D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->3)-[D-Man-alpha-(1->2)-D-Man-alpha-(1->6)]-D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,3-mannosyltransferase
2.5.1.108 2-(3-amino-3-carboxypropyl)histidine synthase S-adenosyl-L-methionine:L-histidine-[translation elongation factor 2] 2-[(3S)-3-amino-3-carboxypropyl]transferase
2.5.1.46 deoxyhypusine synthase [eIF5A-precursor]-lysine:spermidine 4-aminobutyltransferase (propane-1,3-diamine-forming)
2.5.1.60 protein geranylgeranyltransferase type II geranylgeranyl-diphosphate:protein-cysteine geranyltransferase
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] (2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate cistransferase (adding 10–55 isopentenyl units)
2.7.1.108 dolichol kinase CTP:dolichol O-phosphotransferase
2.7.12.1 dual-specificity kinase ATP:protein phosphotransferase (Ser/Thr- and Tyr-phosphorylating)
2.7.7.23 UDP-N-acetylglucosamine diphosphorylase UTP:N-acetyl-alpha-D-glucosamine-1-phosphate uridylyltransferase
2.7.8.15 UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase
2.8.1.8 lipoyl synthase [protein]-N6-(octanoyl)-L-lysine:an [Fe-S] cluster scaffold protein carrying a [4Fe-4S]2+ cluster sulfurtransferase
3.1.3.1 alkaline phosphatase phosphate-monoester phosphohydrolase (alkaline optimum)
3.1.3.16 protein-serine/threonine phosphatase protein-serine/threonine-phosphate phosphohydrolase
3.1.3.54 fructose-2,6-bisphosphate 6-phosphatase beta-D-fructose-2,6-bisphosphate 6-phosphohydrolase
3.1.7.6 farnesyl diphosphatase (2E,6E)-farnesyl-diphosphate diphosphohydrolase
3.4.11.9 Xaa-Pro aminopeptidase
3.4.19.12 ubiquitinyl hydrolase 1
3.4.25.1 proteasome endopeptidase complex
3.5.1.89 N-acetylglucosaminylphosphatidylinositol deacetylase 6-(N-acetyl-alpha-D-glucosaminyl)-1-phosphatidyl-1D-myo-inositol acetylhydrolase
3.5.1.98 histone deacetylase histone amidohydrolase
3.6.4.13 RNA helicase
3.6.4.6 vesicle-fusing ATPase ATP phosphohydrolase (vesicle-fusing)
4.1.1.33 diphosphomevalonate decarboxylase ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP; isopentenyl-diphosphate-forming)
5.3.1.8 mannose-6-phosphate isomerase D-mannose-6-phosphate aldose-ketose-isomerase
5.3.4.1 protein disulfide-isomerase Protein disulfide-isomerase
5.4.2.3 phosphoacetylglucosamine mutase N-Acetyl-alpha-D-glucosamine 1,6-phosphomutase
5.4.2.8 phosphomannomutase alpha-D-mannose 1,6-phosphomutase
5.6.2.1 DNA topoisomerase DNA topoisomerase
5.6.2.2 DNA topoisomerase (ATP-hydrolysing) DNA topoisomerase (ATP-hydrolysing)
6.3.1.14 diphthine-ammonia ligase diphthine-[translation elongation factor 2]:ammonia ligase (AMP-forming)
6.3.1.20 lipoate-protein ligase [lipoyl-carrier protein]-L-lysine:lipoate ligase (AMP-forming)


Proteins

Protein ID name full name
P04786 TOP1 DNA topoisomerase 1
P06786 TOP2 DNA topoisomerase 2
P07283 SEC53 Phosphomannomutase
P07286 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
P11491 PHO8 Repressible alkaline phosphatase
P12695 LAT1 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
P14680 YAK1 Dual specificity protein kinase YAK1
P16661 ALG1 Chitobiosyldiphosphodolichol beta-mannosyltransferase
P17967 PDI1 Protein disulfide-isomerase
P19262 KGD2 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
P20048 SEC59 Dolichol kinase
P20133 BET2 Geranylgeranyl transferase type-2 subunit beta
P20604 SIT4 Serine/threonine-protein phosphatase PP1-1
P20606 SAR1 Small COPII coat GTPase SAR1
P23797 GPI12 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
P24783 DBP2 ATP-dependent RNA helicase DBP2
P25043 PUP1 Proteasome subunit beta type-2
P25694 CDC48 Cell division control protein 48
P29952 PMI40 Mannose-6-phosphate isomerase
P30656 PRE2 Proteasome subunit beta type-5
P30777 GPI10 GPI mannosyltransferase 3
P32324 EFT1 Elongation factor 2
P32377 MVD1 Diphosphomevalonate decarboxylase
P32469 DPH5 Diphthine methyl ester synthase
P32561 RPD3 Histone deacetylase RPD3
P32584 STE14 Protein-S-isoprenylcysteine O-methyltransferase
P32875 LIP5 Lipoyl synthase, mitochondrial
P34251 YKK7_YEAST Uncharacterized oxidoreductase YKL107W
P35127 YUH1 Ubiquitin carboxyl-terminal hydrolase YUH1
P35196 RER2 Dehydrodolichyl diphosphate synthase complex subunit RER2
P36015 YKT6 Synaptobrevin homolog YKT6
P36051 MCD4 GPI ethanolamine phosphate transferase 1
P38074 HMT1 Protein arginine N-methyltransferase 1
P38179 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
P38211 GPI18 GPI mannosyltransferase 2
P38624 PRE3 Proteasome subunit beta type-1
P38628 PCM1 Phosphoacetylglucosamine mutase
P38632 MMS21 E3 SUMO-protein ligase MMS21
P38791 DYS1 Deoxyhypusine synthase
P40032 TPA1 Prolyl 3,4-dihydroxylase TPA1
P40350 ALG5 Dolichyl-phosphate beta-glucosyltransferase
P40351 ALG8 Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
P40367 LAS21 GPI ethanolamine phosphate transferase 2
P40487 DPH1 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1
P40516 EFM4 Protein-lysine N-methyltransferase EFM4
P40526 DFG10 Polyprenal reductase
P43123 QRI1 UDP-N-acetylglucosamine pyrophosphorylase
P43558 OTU1 Ubiquitin thioesterase OTU1
P43577 GNA1 Glucosamine 6-phosphate N-acetyltransferase
P43588 RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11
P43593 UBP6 Ubiquitin carboxyl-terminal hydrolase 6
P43636 ALG2 Alpha-1,3/1,6-mannosyltransferase ALG2
P47026 GWT1 GPI-anchored wall transfer protein 1
P47051 AIM22 Putative lipoate-protein ligase A
P47120 LIA1 Deoxyhypusine hydroxylase
P47163 EFM3 Protein-lysine N-methyltransferase EFM3
P50623 UBC9 SUMO-conjugating enzyme UBC9
P53200 EFM5 Protein-lysine N-methyltransferase EFM5
P53730 ALG12 Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
P53868 ALG9 Alpha-1,2-mannosyltransferase ALG9
Q00618 BET4 Geranylgeranyl transferase type-2 subunit alpha
Q04174 SMP3 GPI mannosyltransferase 4
Q06005 LIP2 Octanoyltransferase, mitochondrial
Q07825 FRA1 Putative Xaa-Pro aminopeptidase FRA1
Q07913 NSE1 Non-structural maintenance of chromosomes element 1
Q12001 ALG6 Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase
Q12063 NUS1 Dehydrodolichyl diphosphate synthase complex subunit NUS1
Q12204 YOR22_YEAST Probable phospholipase YOR022C, mitochondrial
Q12367 RKM5 Ribosomal lysine N-methyltransferase 5
Q12429 DPH6 Diphthine--ammonia ligase