Metabolism of cofactors

Lipmann F. A long life in times of great upheaval. Annu Rev Biochem. 1984;53():1–33. doi: 10.1146/annurev.bi.53.070184.000245. PMID: 6383192.

Metabolites

6-Pyruvoyltetrahydropterin

Formula: C9H11N5O3 (237.0861856)

CAS ID: 89687-39-8

Calcium cation

Formula: Ca (39.962591)

CAS ID: 14127-61-8

CO2

Formula: CO2 (43.98983)

CAS ID: 124-38-9

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Zinc cation

Formula: Zn (63.929145)

CAS ID: 23713-49-7

Ubiquinol-10

Formula: C59H92O4 (864.6995231999999)

CAS ID: 5677-55-4

formate

Formula: CHO2 (44.997654600000004)

CAS ID: 71-47-6

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

3-(4-hydroxyphenyl)pyruvate

Formula: C9H7O4 (179.0344322)

CAS ID: 622-54-8

4-hydroxybenzoate

Formula: C7H5O3 (137.023868)

CAS ID: 456-23-5

citrate(3-)

Formula: C6H5O7 (189.00352800000002)

CAS ID: 126-44-3

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

GTP(4-)

Formula: C10H12N5O14P3 (518.9593642)

CAS ID: 86527-72-2

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8



Enzyme

EC Number name full name note
2.1.1.-
1.1.1.153 sepiapterin reductase (L-erythro-7,8-dihydrobiopterin forming) L-erythro-7,8-dihydrobiopterin:NADP+ oxidoreductase
1.1.1.42 isocitrate dehydrogenase (NADP+) isocitrate:NADP+ oxidoreductase (decarboxylating)
1.13.11.46 4-hydroxymandelate synthase 4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)
1.14.13.39 nitric-oxide synthase (NADPH) L-arginine,NADPH:oxygen oxidoreductase (nitric-oxide-forming)
1.14.15.45 4-hydroxy-3-polyprenylbenzoate 5-hydroxylase 4-hydroxy-3-all-trans-polyprenylbenzoate,ferredoxin:oxygen oxidoreductase (5-hydroxylating)
1.14.15.46 2-methoxy-6-polyprenylphenol 4-hydroxylase 2-methoxy-6-(all-trans-polyprenyl)phenol,ferredoxin:oxygen oxidoreductase (4-hydroxylating)
2.1.1.114 polyprenyldihydroxybenzoate methyltransferase S-adenosyl-L-methionine:3,4-dihydroxy-5-all-trans-polyprenylbenzoate 3-O-methyltransferase
2.1.1.201 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase S-adenosyl-L-methionine:2-methoxy-6-all-trans-polyprenyl-1,4-benzoquinol 5-C-methyltransferase
2.1.1.64 3-demethylubiquinol 3-O-methyltransferase S-adenosyl-L-methionine:3-hydroxy-2-methoxy-5-methyl-6-(all-trans-polyprenyl)-1,4-benzoquinol 3-O-methyltransferase
2.5.1.39 4-hydroxybenzoate polyprenyltransferase polyprenyl-diphosphate:4-hydroxybenzoate polyprenyltransferase
2.5.1.91 all-trans-decaprenyl-diphosphate synthase (2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate farnesyltranstransferase (adding 7 isopentenyl units)
2.7.11.1 non-specific serine/threonine protein kinase ATP:protein phosphotransferase (non-specific)
2.7.11.12 cGMP-dependent protein kinase ATP:protein phosphotransferase (cGMP-dependent)
3.5.4.16 GTP cyclohydrolase I GTP 7,8-8,9-dihydrolase
3.6.4.10 non-chaperonin molecular chaperone ATPase ATP phosphohydrolase (polypeptide-polymerizing)
4.1.1.130 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase 4-hydroxy-3-methoxy-5-all-trans-polyprenylbenzoate carboxy-lyase
4.2.1.3 aconitate hydratase citrate(isocitrate) hydro-lyase (cis-aconitate-forming)
4.2.3.12 6-pyruvoyltetrahydropterin synthase 7,8-dihydroneopterin 3'-triphosphate triphosphate-lyase (6-pyruvoyl-5,6,7,8-tetrahydropterin-forming)


Proteins

Protein ID name full name