dTDP(3-) (BioCAD00000476820)
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Metabolite Card
Formula: C10H13N2O11P2 (398.9995)
SMILES: Cc1cn([C@H]2C[C@H](O)[C@@H](COP([O-])(=O)OP([O-])([O-])=O)O2)c(=O)[nH]c1=O
Synonyms [en]
dTDP(3-); thymidine 5'-diphosphate(3-); thymidine 5'-diphosphate trianion; deoxy-TDP; thymidine 5'-diphosphate; thymidine-diphosphate
Last reviewed on 2024-06-28.
Cite this Page
dTDP(3-). 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/(-)-arctiin
(retrieved
2026-01-03) (CAD Registry RN: BioCAD00000476820). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
An organophosphate oxoanion arising from deprotonation of the diphosphate OH groups of thymidine 5'-diphosphate; major species at pH 7.3." []
DBLinks
- CAS Registry Number:
- PubChem CID: 21124327
- ChEBI: 58369
- HMDB:
- LipidMaps:
- KEGG:
- BioCyc: TDP
- NCBI MeSH: thymidine 5'-diphosphate
- Wikipedia:
Other DBLinks
- PubChem: 21124327
- ChEBI: ChEBI:58369
- BioCyc: TDP
- NCBI MeSH: thymidine 5'-diphosphate
Class / Ontology
- ChEBI: [CHEBI:58369] dTDP(3-)
| ID | EC Number | Name |
|---|---|---|
| Rhea:RHEA:13518 | 2.7.4.12 | dTMP + ATP => dTDP + ADP |
| Rhea:RHEA:13519 | 2.7.4.12 | dTDP + ADP => dTMP + ATP |
| Rhea:RHEA:13520 | 2.7.4.12 | dTMP + ATP <=> dTDP + ADP |
| Rhea:RHEA:14650 | 2.4.1.318 | dTDP-β-L-mycarose + demethyllactenocin => demethylmacrocin + dTDP + H+ |
| Rhea:RHEA:14651 | 2.4.1.318 | demethylmacrocin + dTDP + H+ => dTDP-β-L-mycarose + demethyllactenocin |
| Rhea:RHEA:14652 | 2.4.1.318 | dTDP-β-L-mycarose + demethyllactenocin <=> demethylmacrocin + dTDP + H+ |
| Rhea:RHEA:15358 | 2.4.1.317 | 5-O-β-D-mycaminosyltylonolide + dTDP-6-deoxy-α-D-allose => demethyllactenocin + dTDP + H+ |
| Rhea:RHEA:15359 | 2.4.1.317 | demethyllactenocin + dTDP + H+ => 5-O-β-D-mycaminosyltylonolide + dTDP-6-deoxy-α-D-allose |
| Rhea:RHEA:15360 | 2.4.1.317 | 5-O-β-D-mycaminosyltylonolide + dTDP-6-deoxy-α-D-allose <=> demethyllactenocin + dTDP + H+ |
| Rhea:RHEA:19014 | 3.6.1.39 | dTTP + H2O => dTDP + phosphate + H+ |
| Rhea:RHEA:19015 | 3.6.1.39 | dTDP + phosphate + H+ => dTTP + H2O |
| Rhea:RHEA:19016 | 3.6.1.39 | dTTP + H2O <=> dTDP + phosphate + H+ |
| Rhea:RHEA:21469 | 2.4.1.316 | tylactone + dTDP-α-D-mycaminose => 5-O-β-D-mycaminosyltylactone + dTDP + H+ |
| Rhea:RHEA:21470 | 2.4.1.316 | 5-O-β-D-mycaminosyltylactone + dTDP + H+ => tylactone + dTDP-α-D-mycaminose |
| Rhea:RHEA:21471 | 2.4.1.316 | tylactone + dTDP-α-D-mycaminose <=> 5-O-β-D-mycaminosyltylactone + dTDP + H+ |
| Rhea:RHEA:24393 | 2.4.2.27 | dTDP-L-dihydrostreptose + streptidine 6-phosphate => O-(1→4)-α-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+ |
| Rhea:RHEA:24394 | 2.4.2.27 | O-(1→4)-α-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+ => dTDP-L-dihydrostreptose + streptidine 6-phosphate |
| Rhea:RHEA:24395 | 2.4.2.27 | dTDP-L-dihydrostreptose + streptidine 6-phosphate <=> O-(1→4)-α-L-dihydrostreptosyl-streptidine 6-phosphate + dTDP + H+ |
| Rhea:RHEA:27683 | 2.7.4.6 | dTDP + ATP => dTTP + ADP |
| Rhea:RHEA:27684 | 2.7.4.6 | dTTP + ADP => dTDP + ATP |
Taxonomy Source
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:META_PWY-6658 | acetan biosynthesis |
| BioCyc:META_PWY-6397 | mAGP |
| BioCyc:META_PWY-7198 | pyrimidine deoxyribonucleotides de novo biosynthesis IV |
| BioCyc:META_PWY-6545 | pyrimidine deoxyribonucleotides de novo biosynthesis III |
| BioCyc:META_PWY-5114 | UDP-sugars interconversion |
| BioCyc:META_PWY-7483 | elloramycin biosynthesis |
| BioCyc:META_PWY-6317 | D-galactose degradation I (Leloir pathway) |
| BioCyc:META_PWY-7109 | megalomicin A biosynthesis |
| BioCyc:META_PWY-7677 | rosamicin biosynthesis |
| BioCyc:META_PWY-4821 | UDP-α-D-xylose biosynthesis |
| BioCyc:META_PWY-7422 | methymycin, neomethymycin and novamethymycin biosynthesis |
| BioCyc:META_PWY-7415 | tylosin biosynthesis |
| BioCyc:META_PWY-7328 | superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis |
| BioCyc:META_PWY-7211 | superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis |
| BioCyc:ECO_GLUCOSE1PMETAB-PWY | glucose and glucose-1-phosphate degradation |
| BioCyc:ECO_PWY-7187 | pyrimidine deoxyribonucleotides de novo biosynthesis II |
| BioCyc:ARA_PWY-5114 | UDP-sugars interconversion |
| BioCyc:ARA_PWY-7184 | pyrimidine deoxyribonucleotides de novo biosynthesis I |
| BioCyc:VCHO_ECASYN-PWY | enterobacterial common antigen biosynthesis |
| BioCyc:VCHO_PWY-7184 | pyrimidine deoxyribonucleotides de novo biosynthesis I |