superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis

Dai N, Petreikov M, Portnoy V, Katzir N, Pharr DM, Schaffer AA. Cloning and expression analysis of a UDP-galactose/glucose pyrophosphorylase from melon fruit provides evidence for the major metabolic pathway of galactose metabolism in raffinose oligosaccharide metabolizing plants. Plant Physiol. 2006 Sep;142(1):294–304. PMID: 16829585; PMCID: PMC1557607.; Samuel G, Reeves P. Biosynthesis of O-antigens: genes and pathways involved in nucleotide sugar precursor synthesis and O-antigen assembly. Carbohydr Res. 2003 Nov 14;338(23):2503–19. doi: 10.1016/j.carres.2003.07.009. PMID: 14670712.

Metabolites

Beryllium

Formula: Be (9.012183)

CAS ID: 7440-41-7

Cu+

Formula: Cu (62.929599)

CAS ID: 17493-86-6

D-Glucose 6-phosphate

Formula: C6H13O9P (260.0297178)

CAS ID: 56-73-5

Diphosphate

Formula: H4P2O7 (177.9432294)

CAS ID: 2466-09-3

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

Manganese(2+)

Formula: Mn (54.938046)

CAS ID: 7439-96-5

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

UDP(3-)

Formula: C9H11N2O12P2 (400.9787246)

CAS ID: 86527-70-0

dTDP(3-)

Formula: C10H13N2O11P2 (398.9994588)

CAS ID:



Enzyme

EC Number name full name note
1.1.1.22 UDP-glucose 6-dehydrogenase UDP-alpha-D-glucose:NAD+ 6-oxidoreductase
2.7.7.9 UTP-glucose-1-phosphate uridylyltransferase UTP:alpha-D-glucose-1-phosphate uridylyltransferase
5.1.3.2 UDP-glucose 4-epimerase UDP-glucose 4-epimerase
5.4.2.2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) alpha-D-glucose 1,6-phosphomutase
5.4.99.9 UDP-galactopyranose mutase UDP-D-galactopyranose furanomutase


Proteins

Protein ID name full name
P09147 galE UDP-glucose 4-epimerase
P0AEP3 galU UTP--glucose-1-phosphate uridylyltransferase
P21977 galE UDP-glucose 4-epimerase
P36938 pgm Phosphoglucomutase
P37747 glf UDP-galactopyranose mutase
P76373 ugd UDP-glucose 6-dehydrogenase
P9WIQ1 glf UDP-galactopyranose mutase Glf (UDP-GALP mutase) (NAD+-flavin adenine dinucleotide-requiring enzyme)
P9WN67 galE1 UDP-glucose 4-epimerase GalE1 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase)
Q57346 cap3A UDP-glucose 6-dehydrogenase