Pathways Knowlegdes

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Pathway DOIs Note
phosphatidylethanolamine biosynthesis II

Accession ID: BioCyc:TRYPANO_PWY4FS-6		 -
superpathway of phospholipid biosynthesis

Accession ID: BioCyc:LEISH_PWY3IU-205		 -
ester phospholipid biosynthesis

Accession ID: BioCyc:LEISH_PWY3IU-157
  • 10.1007/bf02534216
  • 10.1016/s0166-6851(02)00220-7
  • 10.1038/sj.emboj.7601565
  • 10.1111/j.1365-2958.2005.04579.x
 Zhang K, Pompey JM, Hsu FF, Key P, Bandhuvula P, Saba JD, Turk J, Beverley SM. Redirection of sphingolipid metabolism toward de novo synthesis of ethanolamine in Leishmania. EMBO J. 2007 Feb 21;26(4):1094–104. PMID: 17290222; PMCID: PMC1852826.; Zufferey R, Mamoun CB. The initial step of glycerolipid metabolism in Leishmania major promastigotes involves a single glycerol-3-phosphate acyltransferase enzyme important for the synthesis of triacylglycerol but not essential for virulence. Molecular Microbiology. 2005 Mar 15;56(3):800–10. doi: 10.1111/j.1365-2958.2005.04579.x.; Zufferey R, Mamoun CB. Choline transport in Leishmania major promastigotes and its inhibition by choline and phosphocholine analogs. Molecular and Biochemical Parasitology. 2002 Nov;125(1-2):127–34. doi: 10.1016/s0166-6851(02)00220-7.; Wassef MK, Fioretti TB, Dwyer DM. Lipid analyses of isolated surface membranes of Leishmania donovani promastigotes. Lipids. 1985 Feb;20(2):108–15. doi: 10.1007/bf02534216. PMID: 3982233.
Kennedy pathway

Accession ID: WikiPathways:WP1771
  • 10.1002/iub.337
 Gibellini F, Smith TK. The Kennedy pathway--De novo synthesis of phosphatidylethanolamine and phosphatidylcholine. IUBMB Life. 2010 Jun;62(6):414–28. doi: 10.1002/iub.337. PMID: 20503434.
Trans-sulfuration, one-carbon metabolism and related pathways

Accession ID: WikiPathways:WP2525
  • 10.1016/j.cmet.2016.08.009
 Ducker GS, Rabinowitz JD. One-Carbon Metabolism in Health and Disease. Cell Metabolism. 2017 Jan;25(1):27–42. doi: 10.1016/j.cmet.2016.08.009.
Biochemical pathways: part I

Accession ID: WikiPathways:WP3604
  • 10.1016/s0303-2647(98)00019-7
 Michal G. On representation of metabolic pathways. Biosystems. 1998 Jun;47(1-2):1–7. doi: 10.1016/s0303-2647(98)00019-7. PMID: 9715748.
Glycerolipids and glycerophospholipids

Accession ID: WikiPathways:WP4345
  • 10.1074/jbc.m110.182915
 Dennis EA, Deems RA, Harkewicz R, Quehenberger O, Brown HA, Milne SB, Myers DS, Glass CK, Hardiman G, Reichart D, Merrill AH, Sullards MC, Wang E, Murphy RC, Raetz CRH, Garrett TA, Guan Z, Ryan AC, Russell DW, McDonald JG, Thompson BM, Shaw WA, Sud M, Zhao Y, Gupta S, Maurya MR, Fahy E, Subramaniam S. A Mouse Macrophage Lipidome. Journal of Biological Chemistry. 2010 Dec;285(51):39976–85. doi: 10.1074/jbc.m110.182915.
Glycerolipids and glycerophospholipids

Accession ID: WikiPathways:WP5296
  • 10.3390/biology3040801
 Yamashita A, Hayashi Y, Matsumoto N, Nemoto-Sasaki Y, Oka S, Tanikawa T, Sugiura T. Glycerophosphate/Acylglycerophosphate acyltransferases. Biology (Basel). 2014 Nov 19;3(4):801–30. PMID: 25415055; PMCID: PMC4280512.
One-carbon metabolism and related pathways

Accession ID: WikiPathways:WP1770		 -
Kennedy pathway from sphingolipids

Accession ID: WikiPathways:WP3933
  • 10.1002/iub.337
 Gibellini F, Smith TK. The Kennedy pathway--De novo synthesis of phosphatidylethanolamine and phosphatidylcholine. IUBMB Life. 2010 Jun;62(6):414–28. doi: 10.1002/iub.337. PMID: 20503434.
Glycerolipids and glycerophospholipids

Accession ID: WikiPathways:WP4722
  • 10.1074/jbc.m110.182915
 Dennis EA, Deems RA, Harkewicz R, Quehenberger O, Brown HA, Milne SB, Myers DS, Glass CK, Hardiman G, Reichart D, Merrill AH, Sullards MC, Wang E, Murphy RC, Raetz CRH, Garrett TA, Guan Z, Ryan AC, Russell DW, McDonald JG, Thompson BM, Shaw WA, Sud M, Zhao Y, Gupta S, Maurya MR, Fahy E, Subramaniam S. A Mouse Macrophage Lipidome. Journal of Biological Chemistry. 2010 Dec;285(51):39976–85. doi: 10.1074/jbc.m110.182915.
Glycerophospholipid biosynthetic pathway

Accession ID: WikiPathways:WP3198		 -
Glycerophospholipid biosynthetic pathway

Accession ID: WikiPathways:WP2533
  • 10.1007/s00018-008-8030-5
 Houtkooper RH, Vaz FM. Cardiolipin, the heart of mitochondrial metabolism. Cellular and Molecular Life Sciences. 2008 Apr 21;65(16):2493–506. doi: 10.1007/s00018-008-8030-5.
One-carbon metabolism and related pathways

Accession ID: WikiPathways:WP3940		 -
Phosphatidylethanolamine Biosynthesis

Accession ID: PathBank:SMP0029731		 -
Phosphatidylcholine Biosynthesis PC(11D3/13D5)

Accession ID: PathBank:SMP0030243		 -
Phosphatidylcholine Biosynthesis PC(11D3/11M5)

Accession ID: PathBank:SMP0030247		 -
Phosphatidylcholine Biosynthesis PC(11D5/11D5)

Accession ID: PathBank:SMP0030251		 -
Phosphatidylcholine Biosynthesis PC(11D5/11M3)

Accession ID: PathBank:SMP0030255		 -
Phosphatidylcholine Biosynthesis PC(13D5/11D3)

Accession ID: PathBank:SMP0030259		 -