Latent infection - Other responses of Mtb to phagocytosis

Russell DG. Mycobacterium tuberculosis and the intimate discourse of a chronic infection. Immunological Reviews. 2011 Feb 23;240(1):252–68. doi: 10.1111/j.1600-065x.2010.00984.x.; Russell DG, Barry CE, Flynn JL. Tuberculosis: what we don't know can, and does, hurt us. Science. 2010 May 14;328(5980):852–6. PMID: 20466922; PMCID: PMC2872107.; de Chastellier C. The many niches and strategies used by pathogenic mycobacteria for survival within host macrophages. Immunobiology. 2009;214(7):526–42. doi: 10.1016/j.imbio.2008.12.005. PMID: 19261352.; Flannagan RS, Cosío G, Grinstein S. Antimicrobial mechanisms of phagocytes and bacterial evasion strategies. Nat Rev Microbiol. 2009 May;7(5):355–66. doi: 10.1038/nrmicro2128. PMID: 19369951.

Metabolites

Ammonia

Formula: NH3 (17.0265478)

CAS ID: 7664-41-7

Copper

Formula: Cu (62.929599)

CAS ID: 7440-50-8

Fe2+

Formula: Fe (55.934939)

CAS ID: 15438-31-0

Fe3+

Formula: Fe (55.934939)

CAS ID: 7439-89-6

Glutathione

Formula: C10H17N3O6S (307.08380220000004)

CAS ID: 70-18-8

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Hydrogen peroxide

Formula: H2O2 (34.0054792)

CAS ID: 7722-84-1

Mycothiol

Formula: C17H30N2O12S (486.15193800000003)

CAS ID: 192126-76-4

Nitric oxide

Formula: NO (29.997989)

CAS ID: 10102-43-9

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Superoxide

Formula: O2 (31.98983)

CAS ID: 11062-77-4

Zinc cation

Formula: Zn (63.929145)

CAS ID: 23713-49-7

Nitrate

Formula: NO3 (61.987819)

CAS ID: 14797-55-8

S-Nitrosoglutathione

Formula: C10H16N4O7S (336.0739666)

CAS ID: 57564-91-7

carbonate

Formula: CO3 (59.984745000000004)

CAS ID: 3812-32-6

nitrite

Formula: NO2 (45.992904)

CAS ID: 14797-65-0

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

NAD(1-)

Formula: C21H26N7O14P2 (662.1012936000001)

CAS ID: 53-84-9

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8

oxidonitrogen(1+)

Formula: NO (29.997989)

CAS ID: 14452-93-8



Enzyme

EC Number name full name note
3.4.21.-
1.1.98.2 glucose-6-phosphate dehydrogenase (coenzyme-F420) D-glucose-6-phosphate:F420 1-oxidoreductase
1.11.1.21 catalase-peroxidase donor:hydrogen-peroxide oxidoreductase
1.11.1.24 thioredoxin-dependent peroxiredoxin thioredoxin:hydroperoxide oxidoreductase
1.11.1.28 lipoyl-dependent peroxiredoxin lipoyl:hydroperoxide oxidoreductase
1.11.1.29 mycoredoxin-dependent peroxiredoxin mycoredoxin:hydroperoxide oxidoreductase
1.15.1.1 superoxide dismutase superoxide:superoxide oxidoreductase
1.16.3.1 ferroxidase Fe(II):oxygen oxidoreductase
1.8.1.4 dihydrolipoyl dehydrogenase protein-N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase
1.8.1.9 thioredoxin-disulfide reductase thioredoxin:NADP+ oxidoreductase
2.3.1.12 dihydrolipoyllysine-residue acetyltransferase acetyl-CoA:enzyme N6-(dihydrolipoyl)lysine S-acetyltransferase
7.4.2.6 ABC-type oligopeptide transporter ATP phosphohydrolase (ABC-type, oligopeptide-importing)
7.4.2.8 protein-secreting ATPase ATP phosphohydrolase (protein-secreting)


Proteins

Protein ID name full name
P9WG35 tpx Thiol peroxidase
P9WGE7 sodB Superoxide dismutase [Fe]
P9WGE9 sodC Superoxide dismutase [Cu-Zn]
P9WGP3 secA2 Protein translocase subunit SecA 2
P9WGP5 secA1 Protein translocase subunit SecA 1
P9WHH1 trxB Thioredoxin reductase
P9WHH9 lpdC Dihydrolipoyl dehydrogenase
P9WIE3 ahpE Alkyl hydroperoxide reductase E
P9WIE5 katG Catalase-peroxidase
P9WIS7 dlaT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
P9WNE1 fgd1 F420-dependent glucose-6-phosphate dehydrogenase Fgd1
P9WNE5 bfrB Bacterioferritin BfrB
P9WPQ9 bfr Bacterioferritin BfrA
P9WQB5 ahpD Alkyl hydroperoxide reductase AhpD
P9WQB7 ahpC Alkyl hydroperoxide reductase C protein AhpC (alkyl hydroperoxidase C)
P9WQJ5 oppD Oligopeptide transport ATP-binding protein OppD
P9WQJ7 irtB Mycobactin import ATP-binding/permease protein IrtB
P9WQJ9 irtA Mycobactin import ATP-binding/permease protein IrtA