5-Formylcytosine (BioCAD00000176610)

blood

Metabolite Card

Formula: C5H5N3O2 (139.0382)
SMILES: NC1=C(C=O)C=NC(=O)N1

Synonyms [en]

4-amino-2-oxopyrimidine-5-carbaldehyde; cytosine-5-carbaldehyde; 5-formylcytosine; 5-Formyl-cytosine; 6-Amino-2-oxo-1,2-dihydropyrimidine-5-carbaldehyde; 5-Pyrimidinecarboxaldehyde, 4-amino-1,2-dihydro-2-oxo- (7CI,8CI,9CI)

Reviewed

Last reviewed on 2024-06-28.

Cite this Page

5-Formylcytosine. 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China. https://biocad_registry.innovation.ac.cn/s/(-)-arctiin (retrieved 2026-01-03) (CAD Registry RN: BioCAD00000176610). Licensed under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).

Note

5-formylcytosine is a nucleobase analogue that is cytosine in which the hydrogen at position 5 is replaced by a formyl group. It has a role as a metabolite. It is an aminopyrimidine, a pyrimidone, a nucleobase analogue and a heteroarenecarbaldehyde. It is functionally related to a cytosine.

Entity Information

DBLinks

Other DBLinks
  • CAS Registry Number: 4425-59-6
  • PubChem: 10986305
  • ChEBI: ChEBI:76794
  • HMDB: HMDB0246797
  • NCBI MeSH: 5-formylcytosine
  • Wikipedia: 5-Formylcytosine
  • MoNA: DNAAdduct001860
  • MoNA: DNAAdduct001861
  • MoNA: DNAAdduct001862
  • MoNA: DNAAdduct001863
  • MoNA: DNAAdduct001864
  • MoNA: DNAAdduct001865
  • MoNA: DNAAdduct001866
  • MoNA: DNAAdduct001867
  • MoNA: DNAAdduct001868
  • MoNA: DNAAdduct001869
  • MoNA: DNAAdduct001870
  • MoNA: DNAAdduct001871
  • MoNA: DNAAdduct001872
  • MoNA: DNAAdduct001873
  • MoNA: DNAAdduct001874
  • MoNA: DNAAdduct001875
  • MoNA: DNAAdduct001876
  • MoNA: DNAAdduct005298
  • MoNA: DNAAdduct005299
  • MoNA: DNAAdduct005300
  • MoNA: DNAAdduct005301
  • MoNA: DNAAdduct005302
  • MoNA: DNAAdduct005305
  • MoNA: DNAAdduct005306
  • MoNA: DNAAdduct005307
  • MoNA: DNAAdduct005308
  • MoNA: DNAAdduct006861
  • MoNA: DNAAdduct006862
  • MoNA: DNAAdduct006863
  • MoNA: DNAAdduct006866
  • MoNA: DNAAdduct006867
  • MoNA: DNAAdduct006868
  • MoNA: DNAAdduct006869
  • MoNA: DNAAdduct006870
  • MoNA: DNAAdduct006871
  • MoNA: DNAAdduct006874
  • MoNA: DNAAdduct006875
  • MoNA: DNAAdduct006876
  • MoNA: DNAAdduct007414
  • MoNA: DNAAdduct007415

Class / Ontology

Metabolic Network
ID EC Number Name
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Organism Source

Taxonomy Source

Pathway Synthetic

pathway id name
Reactome:R-BTA-74160 Gene expression (Transcription)
Reactome:R-BTA-212165 Epigenetic regulation of gene expression
Reactome:R-CFA-212165 Epigenetic regulation of gene expression
Reactome:R-GGA-212165 Epigenetic regulation of gene expression
Reactome:R-HSA-74160 Gene expression (Transcription)
Reactome:R-MMU-74160 Gene expression (Transcription)
Reactome:R-MMU-212165 Epigenetic regulation of gene expression
Reactome:R-RNO-5221030 Oxidative demethylation of DNA
Reactome:R-SSC-5221030 Oxidative demethylation of DNA
Reactome:R-XTR-212165 Epigenetic regulation of gene expression
Reactome:R-CFA-74160 Gene expression (Transcription)
Reactome:R-DRE-5221030 Oxidative demethylation of DNA
Reactome:R-DME-5221030 Oxidative demethylation of DNA
Reactome:R-HSA-212165 Epigenetic regulation of gene expression
Reactome:R-DRE-212165 Epigenetic regulation of gene expression
Reactome:R-DME-74160 Gene expression (Transcription)
Reactome:R-DME-212165 Epigenetic regulation of gene expression
Reactome:R-GGA-74160 Gene expression (Transcription)
Reactome:R-HSA-5221030 Oxidative demethylation of DNA
Reactome:R-RNO-74160 Gene expression (Transcription)
View All Pathways