Pathways Knowlegdes

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Pathway DOIs Note
Calvin-Benson-Bassham cycle

Accession ID: PlantCyc:SOY_CALVIN-PWY
  • 10.1093/jxb/erq461
Gilbert ME, Zwieniecki MA, Holbrook NM. Independent variation in photosynthetic capacity and stomatal conductance leads to differences in intrinsic water use efficiency in 11 soybean genotypes before and during mild drought. J Exp Bot. 2011 May;62(8):2875–87. doi: 10.1093/jxb/erq461. PMID: 21339387.
pentose phosphate pathway (non-oxidative branch)

Accession ID: PlantCyc:SOY_NONOXIPENT-PWY
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Rubisco shunt

Accession ID: PlantCyc:SPIRODELA_PWY-5723
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pentose phosphate pathway

Accession ID: PlantCyc:ACOERULEA_PENTOSE-P-PWY
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pentose phosphate pathway (non-oxidative branch) I

Accession ID: PlantCyc:SUNFLOWER_NONOXIPENT-PWY
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Rubisco shunt

Accession ID: PlantCyc:AHALLERI_PWY-5723
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pentose phosphate pathway

Accession ID: PlantCyc:SUNFLOWER_PENTOSE-P-PWY
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pentose phosphate pathway (non-oxidative branch) I

Accession ID: PlantCyc:AHALLERI_NONOXIPENT-PWY
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pentose phosphate pathway (non-oxidative branch) I

Accession ID: PlantCyc:SVIRIDIS_NONOXIPENT-PWY
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Rubisco shunt

Accession ID: PlantCyc:SWEETORANGE_PWY-5723
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pentose phosphate pathway (non-oxidative branch) I

Accession ID: PlantCyc:ALYRATA_NONOXIPENT-PWY
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Calvin-Benson-Bassham cycle

Accession ID: PlantCyc:ALYRATA_CALVIN-PWY
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pentose phosphate pathway

Accession ID: PlantCyc:ALYRATA_PENTOSE-P-PWY
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Calvin-Benson-Bassham cycle

Accession ID: PlantCyc:SWITCHGRASS_CALVIN-PWY
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Calvin-Benson-Bassham cycle

Accession ID: PlantCyc:AMBORELLA_CALVIN-PWY
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pentose phosphate pathway (non-oxidative branch) I

Accession ID: PlantCyc:AMBORELLA_NONOXIPENT-PWY
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pentose phosphate pathway

Accession ID: PlantCyc:TOMATO_PENTOSE-P-PWY
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pentose phosphate pathway

Accession ID: PlantCyc:ARA_PENTOSE-P-PWY
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pentose phosphate pathway (non-oxidative branch)

Accession ID: PlantCyc:ARA_NONOXIPENT-PWY
  • 10.1016/s1369-5266(03)00039-6
  • 10.1111/j.1399-3054.2009.01276.x
Xiong Y, DeFraia C, Williams D, Zhang X, Mou Z. Deficiency in a cytosolic ribose-5-phosphate isomerase causes chloroplast dysfunction, late flowering and premature cell death in Arabidopsis. Physiologia Plantarum. 2009 Oct 14;137(3):249–63. doi: 10.1111/j.1399-3054.2009.01276.x.; Kruger NJ, von Schaewen A. The oxidative pentose phosphate pathway: structure and organisation. Curr Opin Plant Biol. 2003 Jun;6(3):236–46. doi: 10.1016/s1369-5266(03)00039-6. PMID: 12753973.
Rubisco shunt

Accession ID: PlantCyc:TPARVULA_PWY-5723
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