Pathways Knowlegdes

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Pathway DOIs Note
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:AHALLERI_PWY-5320		 -
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:LER_PWY-5320
  • 10.1002/bit.20154
  • 10.1007/s00425-005-0197-5
  • 10.1007/s004250000492
  • 10.1016/j.phytochem.2003.10.005
  • 10.1016/j.tplants.2005.09.007
  • 10.1016/s1360-1385(00)01720-9
  • 10.1016/s1369-5266(02)00256-x
  • 10.1021/jf061043n
  • 10.1021/np990080o
  • 10.1046/j.1365-313x.1995.08050659.x
  • 10.1074/jbc.m303523200
  • 10.1074/jbc.m611498200
  • 10.1089/jmf.2005.8.281
  • 10.1093/pcp/pcp088
  • 10.1104/pp.113.4.1437
  • 10.1271/bbb.60006
 Masada S, Terasaka K, Oguchi Y, Okazaki S, Mizushima T, Mizukami H. Functional and structural characterization of a flavonoid glucoside 1,6-glucosyltransferase from Catharanthus roseus. Plant Cell Physiol. 2009 Aug;50(8):1401–15. doi: 10.1093/pcp/pcp088. PMID: 19561332.; Yonekura-Sakakibara K, Tohge T, Niida R, Saito K. Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern in Arabidopsis by Transcriptome Coexpression Analysis and Reverse Genetics. Journal of Biological Chemistry. 2007 May;282(20):14932–41. doi: 10.1074/jbc.m611498200.; Kerhoas L, Aouak D, Cingöz A, Routaboul JM, Lepiniec L, Einhorn J, Birlirakis N. Structural characterization of the major flavonoid glycosides from Arabidopsis thaliana seeds. J Agric Food Chem. 2006 Sep 06;54(18):6603–12. doi: 10.1021/jf061043n. PMID: 16939316.; KIM JH, KIM BG, PARK Y, KO JH, LIM CE, LIM J, LIM Y, AHN J. Characterization of Flavonoid 7-O-Glucosyltransferase fromArabidopsis thaliana. Bioscience, Biotechnology, and Biochemistry. 2006 Jun 23;70(6):1471–7. doi: 10.1271/bbb.60006.; Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L. Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta. 2006 Jun;224(1):96–107. doi: 10.1007/s00425-005-0197-5. PMID: 16395586.; Gachon CM, Langlois-Meurinne M, Saindrenan P. Plant secondary metabolism glycosyltransferases: the emerging functional analysis. Trends Plant Sci. 2005 Nov;10(11):542–9. doi: 10.1016/j.tplants.2005.09.007. PMID: 16214386.; Graf BA, Milbury PE, Blumberg JB. Flavonols, Flavones, Flavanones, and Human Health: Epidemiological Evidence. Journal of Medicinal Food. 2005 Sep;8(3):281–90. doi: 10.1089/jmf.2005.8.281.; Kandaswami C, Kanadaswami C, Lee LT, Lee PP, Hwang JJ, Ke FC, Huang YT, Lee MT. The antitumor activities of flavonoids. In Vivo. 2005 Sep;19(5):895–909. PMID: 16097445.; Lim EK, Ashford DA, Hou B, Jackson RG, Bowles DJ. Arabidopsis glycosyltransferases as biocatalysts in fermentation for regioselective synthesis of diverse quercetin glucosides. Biotechnol Bioeng. 2004 Sep 05;87(5):623–31. doi: 10.1002/bit.20154. PMID: 15352060.; Willits MG, Giovanni M, Prata RT, Kramer CM, De Luca V, Steffens JC, Graser G. Bio-fermentation of modified flavonoids: an example of in vivo diversification of secondary metabolites. Phytochemistry. 2004 Jan;65(1):31–41. doi: 10.1016/j.phytochem.2003.10.005. PMID: 14697269.; Jones P, Messner B, Nakajima J, Schäffner AR, Saito K. UGT73C6 and UGT78D1, Glycosyltransferases Involved in Flavonol Glycoside Biosynthesis in Arabidopsis thaliana. Journal of Biological Chemistry. 2003 Nov;278(45):43910–8. doi: 10.1074/jbc.m303523200.; Winkel-Shirley B. Biosynthesis of flavonoids and effects of stress. Curr Opin Plant Biol. 2002 Jun;5(3):218–23. doi: 10.1016/s1369-5266(02)00256-x. PMID: 11960739.; Jones P, Vogt T. Glycosyltransferases in secondary plant metabolism: tranquilizers and stimulant controllers. Planta. 2001 Jun;213(2):164–74. doi: 10.1007/s004250000492. PMID: 11469580.; Vogt T, Jones P. Glycosyltransferases in plant natural product synthesis: characterization of a supergene family. Trends Plant Sci. 2000 Sep;5(9):380–6. doi: 10.1016/s1360-1385(00)01720-9. PMID: 10973093.; Veit M, Pauli GF. Major flavonoids from Arabidopsis thaliana leaves. J Nat Prod. 1999 Sep;62(9):1301–3. doi: 10.1021/np990080o. PMID: 10514319.; Pelletier MK, Murrell JR, Shirley BW. Characterization of flavonol synthase and leucoanthocyanidin dioxygenase genes in Arabidopsis. Further evidence for differential regulation of 'early' and 'late' genes. Plant Physiol. 1997 Apr;113(4):1437–45. PMID: 9112784; PMCID: PMC158268.; Shirley BW, Kubasek WL, Storz G, Bruggemann E, Koornneef M, Ausubel FM, Goodman HM. Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. The Plant Journal. 1995 Nov;8(5):659–71. doi: 10.1046/j.1365-313x.1995.08050659.x.
kaempferol triglucoside biosynthesis

Accession ID: PlantCyc:LER_PWY-5348		 -
flavonol glucosylation I

Accession ID: PlantCyc:AMBORELLA_PWY-6360		 -
superpathway of flavones and derivatives biosynthesis

Accession ID: PlantCyc:BOLERACEA_OLERACEA_PWY-6266-ARA		 -
superpathway of flavones and derivatives biosynthesis

Accession ID: PlantCyc:BSTRICTA_PWY-6266-ARA		 -
flavonol glucosylation I

Accession ID: PlantCyc:BSTRICTA_PWY-6360		 -
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:OILSEEDRAPE_PWY-5320		 -
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:PLANT_PWY-5320
  • 10.1002/bit.20154
  • 10.1007/s00425-005-0197-5
  • 10.1007/s004250000492
  • 10.1016/j.phytochem.2003.10.005
  • 10.1016/j.tplants.2005.09.007
  • 10.1016/s1360-1385(00)01720-9
  • 10.1016/s1369-5266(02)00256-x
  • 10.1021/jf061043n
  • 10.1021/np990080o
  • 10.1046/j.1365-313x.1995.08050659.x
  • 10.1074/jbc.m303523200
  • 10.1074/jbc.m611498200
  • 10.1089/jmf.2005.8.281
  • 10.1093/pcp/pcp088
  • 10.1104/pp.113.4.1437
  • 10.1271/bbb.60006
 Masada S, Terasaka K, Oguchi Y, Okazaki S, Mizushima T, Mizukami H. Functional and structural characterization of a flavonoid glucoside 1,6-glucosyltransferase from Catharanthus roseus. Plant Cell Physiol. 2009 Aug;50(8):1401–15. doi: 10.1093/pcp/pcp088. PMID: 19561332.; Yonekura-Sakakibara K, Tohge T, Niida R, Saito K. Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern in Arabidopsis by Transcriptome Coexpression Analysis and Reverse Genetics. Journal of Biological Chemistry. 2007 May;282(20):14932–41. doi: 10.1074/jbc.m611498200.; Kerhoas L, Aouak D, Cingöz A, Routaboul JM, Lepiniec L, Einhorn J, Birlirakis N. Structural characterization of the major flavonoid glycosides from Arabidopsis thaliana seeds. J Agric Food Chem. 2006 Sep 06;54(18):6603–12. doi: 10.1021/jf061043n. PMID: 16939316.; KIM JH, KIM BG, PARK Y, KO JH, LIM CE, LIM J, LIM Y, AHN J. Characterization of Flavonoid 7-O-Glucosyltransferase fromArabidopsis thaliana. Bioscience, Biotechnology, and Biochemistry. 2006 Jun 23;70(6):1471–7. doi: 10.1271/bbb.60006.; Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L. Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta. 2006 Jun;224(1):96–107. doi: 10.1007/s00425-005-0197-5. PMID: 16395586.; Gachon CM, Langlois-Meurinne M, Saindrenan P. Plant secondary metabolism glycosyltransferases: the emerging functional analysis. Trends Plant Sci. 2005 Nov;10(11):542–9. doi: 10.1016/j.tplants.2005.09.007. PMID: 16214386.; Graf BA, Milbury PE, Blumberg JB. Flavonols, Flavones, Flavanones, and Human Health: Epidemiological Evidence. Journal of Medicinal Food. 2005 Sep;8(3):281–90. doi: 10.1089/jmf.2005.8.281.; Kandaswami C, Kanadaswami C, Lee LT, Lee PP, Hwang JJ, Ke FC, Huang YT, Lee MT. The antitumor activities of flavonoids. In Vivo. 2005 Sep;19(5):895–909. PMID: 16097445.; Lim EK, Ashford DA, Hou B, Jackson RG, Bowles DJ. Arabidopsis glycosyltransferases as biocatalysts in fermentation for regioselective synthesis of diverse quercetin glucosides. Biotechnol Bioeng. 2004 Sep 05;87(5):623–31. doi: 10.1002/bit.20154. PMID: 15352060.; Willits MG, Giovanni M, Prata RT, Kramer CM, De Luca V, Steffens JC, Graser G. Bio-fermentation of modified flavonoids: an example of in vivo diversification of secondary metabolites. Phytochemistry. 2004 Jan;65(1):31–41. doi: 10.1016/j.phytochem.2003.10.005. PMID: 14697269.; Jones P, Messner B, Nakajima J, Schäffner AR, Saito K. UGT73C6 and UGT78D1, Glycosyltransferases Involved in Flavonol Glycoside Biosynthesis in Arabidopsis thaliana. Journal of Biological Chemistry. 2003 Nov;278(45):43910–8. doi: 10.1074/jbc.m303523200.; Winkel-Shirley B. Biosynthesis of flavonoids and effects of stress. Curr Opin Plant Biol. 2002 Jun;5(3):218–23. doi: 10.1016/s1369-5266(02)00256-x. PMID: 11960739.; Jones P, Vogt T. Glycosyltransferases in secondary plant metabolism: tranquilizers and stimulant controllers. Planta. 2001 Jun;213(2):164–74. doi: 10.1007/s004250000492. PMID: 11469580.; Vogt T, Jones P. Glycosyltransferases in plant natural product synthesis: characterization of a supergene family. Trends Plant Sci. 2000 Sep;5(9):380–6. doi: 10.1016/s1360-1385(00)01720-9. PMID: 10973093.; Veit M, Pauli GF. Major flavonoids from Arabidopsis thaliana leaves. J Nat Prod. 1999 Sep;62(9):1301–3. doi: 10.1021/np990080o. PMID: 10514319.; Pelletier MK, Murrell JR, Shirley BW. Characterization of flavonol synthase and leucoanthocyanidin dioxygenase genes in Arabidopsis. Further evidence for differential regulation of 'early' and 'late' genes. Plant Physiol. 1997 Apr;113(4):1437–45. PMID: 9112784; PMCID: PMC158268.; Shirley BW, Kubasek WL, Storz G, Bruggemann E, Koornneef M, Ausubel FM, Goodman HM. Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. The Plant Journal. 1995 Nov;8(5):659–71. doi: 10.1046/j.1365-313x.1995.08050659.x.
flavonol glucosylation I

Accession ID: PlantCyc:SFALLAX_PWY-6360		 -
flavonol glucosylation I

Accession ID: PlantCyc:SPIDERFLOWER_PWY-6360		 -
flavonol glucosylation I

Accession ID: PlantCyc:TPARVULA_PWY-6360		 -
flavonol glucosylation I

Accession ID: PlantCyc:PIGEONPEA_PWY-6360		 -
superpathway of flavones and derivatives biosynthesis

Accession ID: PlantCyc:LER_PWY-6266
  • 10.1006/abbi.1997.0554
  • 10.1016/0003-9861(82)90569-0
  • 10.1074/jbc.m303523200
  • 10.1074/jbc.m611498200
  • 10.1093/pcp/pcp088
  • 10.1104/pp.109.152801
  • 10.1111/j.1432-1033.1983.tb07601.x
  • 10.1186/1471-2229-10-21
 Han Y, Vimolmangkang S, Soria-Guerra RE, Rosales-Mendoza S, Zheng D, Lygin AV, Korban SS. Ectopic expression of apple F3'H genes contributes to anthocyanin accumulation in the Arabidopsis tt7 mutant grown under nitrogen stress. Plant Physiol. 2010 Jun;153(2):806–20. PMID: 20357139; PMCID: PMC2879788.; Olsen KM, Hehn A, Jugdé H, Slimestad R, Larbat R, Bourgaud F, Lillo C. Identification and characterisation of CYP75A31, a new flavonoid 3'5'-hydroxylase, isolated from Solanum lycopersicum. BMC Plant Biol. 2010 Feb 03;10():21. PMID: 20128892; PMCID: PMC2825239.; Masada S, Terasaka K, Oguchi Y, Okazaki S, Mizushima T, Mizukami H. Functional and structural characterization of a flavonoid glucoside 1,6-glucosyltransferase from Catharanthus roseus. Plant Cell Physiol. 2009 Aug;50(8):1401–15. doi: 10.1093/pcp/pcp088. PMID: 19561332.; Yonekura-Sakakibara K, Tohge T, Niida R, Saito K. Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern in Arabidopsis by Transcriptome Coexpression Analysis and Reverse Genetics. Journal of Biological Chemistry. 2007 May;282(20):14932–41. doi: 10.1074/jbc.m611498200.; Jones P, Messner B, Nakajima J, Schäffner AR, Saito K. UGT73C6 and UGT78D1, Glycosyltransferases Involved in Flavonol Glycoside Biosynthesis in Arabidopsis thaliana. Journal of Biological Chemistry. 2003 Nov;278(45):43910–8. doi: 10.1074/jbc.m303523200.; Gauthier A, Gulick PJ, Ibrahim RK. Characterization of Two cDNA Clones Which EncodeO-Methyltransferases for the Methylation of both Flavonoid and Phenylpropanoid Compounds. Archives of Biochemistry and Biophysics. 1998 Mar;351(2):243–9. doi: 10.1006/abbi.1997.0554.; HAGMANN M, HELLER W, GRISEBACH H. Induction and Characterization of a Microsomal Flavonoid 3'-Hydroxylase from Parsley Cell Cultures. European Journal of Biochemistry. 1983 Aug;134(3):547–54. doi: 10.1111/j.1432-1033.1983.tb07601.x.; Jourdan PS, Mansell RL. Isolation and partial characterization of three glucosyl transferases involved in the biosynthesis of flavonol triglucosides in Pisum sativum L. Archives of Biochemistry and Biophysics. 1982 Feb;213(2):434–43. doi: 10.1016/0003-9861(82)90569-0.
flavonol glucosylation I

Accession ID: PlantCyc:LJAPONICUS_PWY-6360		 -
superpathway of flavones and derivatives biosynthesis

Accession ID: PlantCyc:AHALLERI_PWY-6266-ARA		 -
flavonol glucosylation I

Accession ID: PlantCyc:ALYRATA_PWY-6360		 -
kaempferol triglucoside biosynthesis

Accession ID: PlantCyc:ARA_PWY-5348		 -
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:BOLERACEA_OLERACEA_PWY-5320		 -
kaempferol glycoside biosynthesis (Arabidopsis)

Accession ID: PlantCyc:CHINESECABBAGE_PWY-5320		 -