Pathways Knowlegdes

Necessitatibus eius consequatur ex aliquid fuga eum quidem sint consectetur velit

Pathway DOIs Note
nitrate reduction V (assimilatory)

Accession ID: BioCyc:META_PWY-5675
  • 10.1016/0003-9861(72)90181-6
  • 10.1016/0005-2744(78)90289-9
  • 10.1016/s0021-9258(19)40804-1
  • 10.1016/s0021-9258(19)68821-6
  • 10.1016/s0021-9258(19)81274-7
  • 10.1016/s0065-2911(08)60414-2
  • 10.1042/bj1040103
  • 10.1074/jbc.271.39.24096
  • 10.1128/jb.175.8.2379-2392.1993
 Colandene JD, Garrett RH. Functional Dissection and Site-directed Mutagenesis of the Structural Gene for NAD(P)H-Nitrite Reductase in Neurospora crassa. Journal of Biological Chemistry. 1996 Sep;271(39):24096–104. doi: 10.1074/jbc.271.39.24096.; Exley GE, Colandene JD, Garrett RH. Molecular cloning, characterization, and nucleotide sequence of nit-6, the structural gene for nitrite reductase in Neurospora crassa. J Bacteriol. 1993 Apr;175(8):2379–92. doi: 10.1128/jb.175.8.2379-2392.1993.; Prodouz KN, Garrett RH. Neurospora crassa NAD(P)H-nitrite reductase. Studies on its composition and structure. Journal of Biological Chemistry. 1981 Sep;256(18):9711–7. doi: 10.1016/s0021-9258(19)68821-6.; Greenbaum P, Prodouz KN, Garrett RH. Preparation and some properties of homogeneous Neurospora crassa assimilatory NADPH-nitrite reductase. Biochimica et Biophysica Acta (BBA) - Enzymology. 1978 Sep;526(1):52–64. doi: 10.1016/0005-2744(78)90289-9.; Garrett RH, Amy NK. Nitrate assimilation in fungi. Adv Microb Physiol. 1978;18():1–65. doi: 10.1016/s0065-2911(08)60414-2. PMID: 157059.; Vega J, Garrett R. Siroheme: a prosthetic group of the Neurospora crassa assimilatory nitrite reductase. Journal of Biological Chemistry. 1975 Oct;250(20):7980–9. doi: 10.1016/s0021-9258(19)40804-1.; Lafferty MA, Garrett RH. Purification and Properties of the Neurospora crassa Assimilatory Nitrite Reductase. Journal of Biological Chemistry. 1974 Dec;249(23):7555–67. doi: 10.1016/s0021-9258(19)81274-7.; Prakash O, Sadana JC. Purification, characterization and properties of nitrite reductase of Achromobacter fischeri. Archives of Biochemistry and Biophysics. 1972 Feb;148(2):614–32. doi: 10.1016/0003-9861(72)90181-6.; Pateman JA, Rever BM, Cove DJ. Genetic and biochemical studies of nitrate reduction in Aspergillus nidulans. Biochem J. 1967 Jul;104(1):103–11. PMID: 4382427; PMCID: PMC1270550.
alkylnitronates degradation

Accession ID: BioCyc:META_PWY-723
  • 10.1007/bf00446519
  • 10.1016/0003-9861(72)90181-6
  • 10.1016/0005-2744(78)90289-9
  • 10.1016/s0021-9258(17)32932-0
  • 10.1016/s0021-9258(19)40804-1
  • 10.1016/s0021-9258(19)68821-6
  • 10.1016/s0021-9258(19)81274-7
  • 10.1042/bj1040103
  • 10.1074/jbc.271.39.24096
  • 10.1128/aem.64.3.1029-1033.1998
  • 10.1128/jb.175.8.2379-2392.1993
 Gorlatova N, Tchorzewski M, Kurihara T, Soda K, Esaki N. Purification, Characterization, and Mechanism of a Flavin Mononucleotide-Dependent 2-Nitropropane Dioxygenase from Neurospora crassa. Appl Environ Microbiol. 1998 Mar;64(3):1029–33. doi: 10.1128/aem.64.3.1029-1033.1998.; Colandene JD, Garrett RH. Functional Dissection and Site-directed Mutagenesis of the Structural Gene for NAD(P)H-Nitrite Reductase in Neurospora crassa. Journal of Biological Chemistry. 1996 Sep;271(39):24096–104. doi: 10.1074/jbc.271.39.24096.; Exley GE, Colandene JD, Garrett RH. Molecular cloning, characterization, and nucleotide sequence of nit-6, the structural gene for nitrite reductase in Neurospora crassa. J Bacteriol. 1993 Apr;175(8):2379–92. doi: 10.1128/jb.175.8.2379-2392.1993.; Prodouz KN, Garrett RH. Neurospora crassa NAD(P)H-nitrite reductase. Studies on its composition and structure. Journal of Biological Chemistry. 1981 Sep;256(18):9711–7. doi: 10.1016/s0021-9258(19)68821-6.; Greenbaum P, Prodouz KN, Garrett RH. Preparation and some properties of homogeneous Neurospora crassa assimilatory NADPH-nitrite reductase. Biochimica et Biophysica Acta (BBA) - Enzymology. 1978 Sep;526(1):52–64. doi: 10.1016/0005-2744(78)90289-9.; Kido T, Soda K, Suzuki T, Asada K. A new oxygenase, 2-nitropropane dioxygenase of Hansenula mrakii. Enzymologic and spectrophotometric properties. Journal of Biological Chemistry. 1976 Nov;251(22):6994–7000. doi: 10.1016/s0021-9258(17)32932-0.; Kido T, Yamamoto T, Soda K. Microbial assimilation of alkyl nitro compounds and formation of nitrite. Arch Microbiol. 1975 Dec 31;106(3):165–9. doi: 10.1007/bf00446519. PMID: 1217935.; Vega J, Garrett R. Siroheme: a prosthetic group of the Neurospora crassa assimilatory nitrite reductase. Journal of Biological Chemistry. 1975 Oct;250(20):7980–9. doi: 10.1016/s0021-9258(19)40804-1.; Lafferty MA, Garrett RH. Purification and Properties of the Neurospora crassa Assimilatory Nitrite Reductase. Journal of Biological Chemistry. 1974 Dec;249(23):7555–67. doi: 10.1016/s0021-9258(19)81274-7.; Prakash O, Sadana JC. Purification, characterization and properties of nitrite reductase of Achromobacter fischeri. Archives of Biochemistry and Biophysics. 1972 Feb;148(2):614–32. doi: 10.1016/0003-9861(72)90181-6.; Pateman JA, Rever BM, Cove DJ. Genetic and biochemical studies of nitrate reduction in Aspergillus nidulans. Biochem J. 1967 Jul;104(1):103–11. PMID: 4382427; PMCID: PMC1270550.
sulfolactate degradation III

Accession ID: BioCyc:THAPS_PWY-6638		 -
(R)-cysteate degradation

Accession ID: BioCyc:THAPS_PWY-6642		 -
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-PFA-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.
Metabolism

Accession ID: Reactome:R-BTA-1430728		 -
Amino acid and derivative metabolism

Accession ID: Reactome:R-BTA-71291
  • 10.1007/978-1-4757-0734-2_8
  • 10.1146/annurev.bi.44.070175.004441
  • 10.1177/014860719001400405
 Häussinger D. Liver glutamine metabolism. JPEN J Parenter Enteral Nutr. 1990 Jul;14(4 Suppl):56S–62S. doi: 10.1177/014860719001400405. PMID: 2205732.; Owen OE, Reichard GA, Patel MS, Boden G. Energy metabolism in feasting and fasting. Adv Exp Med Biol. 1979;111():169–88. doi: 10.1007/978-1-4757-0734-2_8. PMID: 371355.; Felig P. Amino acid metabolism in man. Annu Rev Biochem. 1975;44():933–55. doi: 10.1146/annurev.bi.44.070175.004441. PMID: 1094924.
Sulfur amino acid metabolism

Accession ID: Reactome:R-CEL-1614635
  • 10.1093/jn/136.6.1636s
 Brosnan JT, Brosnan ME. The sulfur-containing amino acids: an overview. J Nutr. 2006 Jun;136(6 Suppl):1636S–1640S. doi: 10.1093/jn/136.6.1636s. PMID: 16702333.
Metabolism

Accession ID: Reactome:R-CFA-1430728		 -
Sulfur amino acid metabolism

Accession ID: Reactome:R-CFA-1614635
  • 10.1093/jn/136.6.1636s
 Brosnan JT, Brosnan ME. The sulfur-containing amino acids: an overview. J Nutr. 2006 Jun;136(6 Suppl):1636S–1640S. doi: 10.1093/jn/136.6.1636s. PMID: 16702333.
Amino acid and derivative metabolism

Accession ID: Reactome:R-DRE-71291
  • 10.1007/978-1-4757-0734-2_8
  • 10.1146/annurev.bi.44.070175.004441
  • 10.1177/014860719001400405
 Häussinger D. Liver glutamine metabolism. JPEN J Parenter Enteral Nutr. 1990 Jul;14(4 Suppl):56S–62S. doi: 10.1177/014860719001400405. PMID: 2205732.; Owen OE, Reichard GA, Patel MS, Boden G. Energy metabolism in feasting and fasting. Adv Exp Med Biol. 1979;111():169–88. doi: 10.1007/978-1-4757-0734-2_8. PMID: 371355.; Felig P. Amino acid metabolism in man. Annu Rev Biochem. 1975;44():933–55. doi: 10.1146/annurev.bi.44.070175.004441. PMID: 1094924.
Sulfur amino acid metabolism

Accession ID: Reactome:R-GGA-1614635
  • 10.1093/jn/136.6.1636s
 Brosnan JT, Brosnan ME. The sulfur-containing amino acids: an overview. J Nutr. 2006 Jun;136(6 Suppl):1636S–1640S. doi: 10.1093/jn/136.6.1636s. PMID: 16702333.
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-HSA-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.
Metabolism

Accession ID: Reactome:R-MMU-1430728		 -
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-MMU-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-RNO-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.
Amino acid and derivative metabolism

Accession ID: Reactome:R-SCE-71291
  • 10.1007/978-1-4757-0734-2_8
  • 10.1146/annurev.bi.44.070175.004441
  • 10.1177/014860719001400405
 Häussinger D. Liver glutamine metabolism. JPEN J Parenter Enteral Nutr. 1990 Jul;14(4 Suppl):56S–62S. doi: 10.1177/014860719001400405. PMID: 2205732.; Owen OE, Reichard GA, Patel MS, Boden G. Energy metabolism in feasting and fasting. Adv Exp Med Biol. 1979;111():169–88. doi: 10.1007/978-1-4757-0734-2_8. PMID: 371355.; Felig P. Amino acid metabolism in man. Annu Rev Biochem. 1975;44():933–55. doi: 10.1146/annurev.bi.44.070175.004441. PMID: 1094924.
Metabolism

Accession ID: Reactome:R-SPO-1430728		 -
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-SPO-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.
Degradation of cysteine and homocysteine

Accession ID: Reactome:R-SSC-1614558
  • 10.1007/s10545-009-9006-9
 Stipanuk MH, Ueki I. Dealing with methionine/homocysteine sulfur: cysteine metabolism to taurine and inorganic sulfur. J of Inher Metab Disea. 2010 Feb 17;34(1):17–32. doi: 10.1007/s10545-009-9006-9.