Pathways Knowlegdes

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Pathway DOIs Note
GA12 biosynthesis

Accession ID: BioCyc:META_PWY-5034
  • 10.1104/pp.103.021725
 Fleet CM, Yamaguchi S, Hanada A, Kawaide H, David CJ, Kamiya Y, Sun T. Overexpression of AtCPS and AtKS in Arabidopsis Confers Increased ent-Kaurene Production But No Increase in Bioactive Gibberellins. 2003 Jun 01;132(2):830–9. doi: 10.1104/pp.103.021725.
ent -kaurene biosynthesis II

Accession ID: BioCyc:META_PWY-6653
  • 10.1016/j.febslet.2006.10.018
 Hayashi K, Kawaide H, Notomi M, Sakigi Y, Matsuo A, Nozaki H. Identification and functional analysis of bifunctional ent-kaurene synthase from the moss Physcomitrella patens. FEBS Letters. 2006 Oct 17;580(26):6175–81. doi: 10.1016/j.febslet.2006.10.018.
kauralexin biosynthesis

Accession ID: BioCyc:META_PWY-6887
  • 10.1073/pnas.1014714108
  • 10.1104/pp.64.3.406
 Schmelz EA, Kaplan F, Huffaker A, Dafoe NJ, Vaughan MM, Ni X, Rocca JR, Alborn HT, Teal PE. Identity, regulation, and activity of inducible diterpenoid phytoalexins in maize. Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5455–60. PMID: 21402917; PMCID: PMC3069164.; Mellon JE, West CA. Diterpene biosynthesis in maize seedlings in response to fungal infection. Plant Physiol. 1979 Sep;64(3):406–10. PMID: 16660976; PMCID: PMC543101.
gibberellin biosynthesis IV (Gibberella fujikuroi)

Accession ID: BioCyc:META_PWY-5047
  • 10.1073/pnas.091096298
  • 10.1074/jbc.m201651200
  • 10.1074/jbc.m308517200
 Malonek S, Rojas MC, Hedden P, Gaskin P, Hopkins P, Tudzynski B. The NADPH-cytochrome P450 Reductase Gene from Gibberella fujikuroi Is Essential for Gibberellin Biosynthesis. Journal of Biological Chemistry. 2004 Jun;279(24):25075–84. doi: 10.1074/jbc.m308517200.; Tudzynski B, Rojas MC, Gaskin P, Hedden P. The Gibberellin 20-Oxidase of Gibberella fujikuroi Is a Multifunctional Monooxygenase. Journal of Biological Chemistry. 2002 Jun;277(24):21246–53. doi: 10.1074/jbc.m201651200.; Rojas MC, Hedden P, Gaskin P, Tudzynski B. The P450–1 gene of Gibberella fujikuroi encodes a multifunctional enzyme in gibberellin biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 2001 Apr 24;98(10):5838–43. doi: 10.1073/pnas.091096298.
superpathway of gibberellin biosynthesis

Accession ID: BioCyc:META_PWY-5052
  • 10.1007/s003440010038
  • 10.1042/bj20120245
  • 10.1073/pnas.141239398
  • 10.1105/tpc.11.5.927
 Hedden P, Thomas S. Gibberellin biosynthesis and its regulation. 2012 Apr 26;444(1):11–25. doi: 10.1042/bj20120245.; MacMillan J. Occurrence of Gibberellins in Vascular Plants, Fungi, and Bacteria. J Plant Growth Regul. 2001 Dec;20(4):387–442. doi: 10.1007/s003440010038. PMID: 11986764.; Itoh H, Ueguchi-Tanaka M, Sentoku N, Kitano H, Matsuoka M, Kobayashi M. Cloning and functional analysis of two gibberellin 3 beta -hydroxylase genes that are differently expressed during the growth of rice. Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8909–14. PMID: 11438692; PMCID: PMC37534.; Xu Y, Li L, Gage DA, Zeevaart JAD. Feedback Regulation of GA5 Expression and Metabolic Engineering of Gibberellin Levels in Arabidopsis. Plant Cell. 1999 May;11(5):927–35. doi: 10.1105/tpc.11.5.927.
ent-kaurene biosynthesis I

Accession ID: BioCyc:META_PWY-5032		 -
GA12 biosynthesis

Accession ID: BioCyc:ARA_PWY-5034
  • 10.1104/pp.103.021725
 Fleet CM, Yamaguchi S, Hanada A, Kawaide H, David CJ, Kamiya Y, Sun T. Overexpression of AtCPS and AtKS in Arabidopsis Confers Increased ent-Kaurene Production But No Increase in Bioactive Gibberellins. 2003 Jun 01;132(2):830–9. doi: 10.1104/pp.103.021725.
superpathway of gibberellin GA12 biosynthesis

Accession ID: BioCyc:META_PWY-5053		 -
ent-kaurene biosynthesis I

Accession ID: BioCyc:ARA_PWY-5032		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-OAU-2744345		 -
GA12 biosynthesis

Accession ID: Plant Reactome:R-FVE-1119557		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-MES-2744345		 -
Hormone signaling, transport, and metabolism

Accession ID: Plant Reactome:R-MES-2744341		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-TDI-2744345		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-DRO-2744345		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-PTI-2744345		 -
Hormone signaling, transport, and metabolism

Accession ID: Plant Reactome:R-PTI-2744341		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-GMA-2744345		 -
Secondary metabolism

Accession ID: Plant Reactome:R-GMA-2744344		 -
Metabolism and regulation

Accession ID: Plant Reactome:R-PDA-2744345		 -