Pathways Knowlegdes

Necessitatibus eius consequatur ex aliquid fuga eum quidem sint consectetur velit

Pathway DOIs Note
CMP-N-acetylneuraminate biosynthesis I (eukaryotes)

Accession ID: BioCyc:HUMAN_PWY-6138
  • 10.1007/s10719-006-6484-y
  • 10.1016/j.bioorg.2005.01.005
  • 10.1016/j.jmb.2007.03.037
 Ghaderi D, Strauss HM, Reinke S, Cirak S, Reutter W, Lucka L, Hinderlich S. Evidence for dynamic interplay of different oligomeric states of UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase by biophysical methods. J Mol Biol. 2007 Jun 08;369(3):746–58. doi: 10.1016/j.jmb.2007.03.037. PMID: 17448495.; Inoue S, Kitajima K. KDN (deaminated neuraminic acid): dreamful past and exciting future of the newest member of the sialic acid family. Glycoconj J. 2006 Jul;23(5-6):277–90. doi: 10.1007/s10719-006-6484-y. PMID: 16897172.; Tanner ME. The enzymes of sialic acid biosynthesis. Bioorg Chem. 2005 Jun;33(3):216–28. doi: 10.1016/j.bioorg.2005.01.005. PMID: 15888312.
5-aminoimidazole ribonucleotide biosynthesis

Accession ID: BioCyc:HUMAN_PWY-6121
  • 10.1039/c3cc41437j
 Zhao H, French JB, Fang Y, Benkovic SJ. The purinosome, a multi-protein complex involved in the de novo biosynthesis of purines in humans. Chem Commun (Camb). 2013 May 18;49(40):4444–52. PMID: 23575936; PMCID: PMC3877848.
NAD salvage

Accession ID: BioCyc:HUMAN_NAD-BIOSYNTHESIS-III		 -
urea cycle

Accession ID: BioCyc:HUMAN_PWY-4984
  • 10.1146/annurev.ge.20.120186.002243
 Jackson MJ, Beaudet AL, O'Brien WE. Mammalian urea cycle enzymes. Annu Rev Genet. 1986;20():431–64. doi: 10.1146/annurev.ge.20.120186.002243. PMID: 3545062.
acetate conversion to acetyl-CoA

Accession ID: BioCyc:HUMAN_PWY0-1313		 -
biotin-carboxyl carrier protein assembly

Accession ID: BioCyc:HUMAN_PWY0-1264		 -
oxidative ethanol degradation III

Accession ID: BioCyc:HUMAN_PWY66-161		 -
GDP-glucose biosynthesis II

Accession ID: BioCyc:HUMAN_PWY-5661-1
  • 10.1016/s0021-9258(18)60318-7
 Carlson DM, Hansen RG. The Isolation and Synthesis of Guanosine Diphosphate Glucose. Journal of Biological Chemistry. 1962 Apr;237(4):1260–5. doi: 10.1016/s0021-9258(18)60318-7.
geranylgeranyldiphosphate biosynthesis

Accession ID: BioCyc:HUMAN_PWY-5120		 -
tRNA splicing II

Accession ID: BioCyc:HUMAN_PWY-7803		 -
superpathway of tryptophan utilization

Accession ID: BioCyc:HUMAN_PWY66-401		 -
CDP-diacylglycerol biosynthesis

Accession ID: BioCyc:HUMAN_PWY-5667		 -
arachidonate biosynthesis III (metazoa)

Accession ID: BioCyc:HUMAN_PWY-7592		 -
3-phosphoinositide biosynthesis

Accession ID: BioCyc:HUMAN_PWY-6352
  • 10.1002/bies.950160810
 Kapeller R, Cantley LC. Phosphatidylinositol 3-kinase. Bioessays. 1994 Aug;16(8):565–76. doi: 10.1002/bies.950160810. PMID: 8086005.
tRNA-uridine 2-thiolation (cytoplasmic)

Accession ID: BioCyc:HUMAN_PWY-7888		 -
asparagine biosynthesis

Accession ID: BioCyc:HUMAN_ASPARAGINE-BIOSYNTHESIS
  • 10.1016/0005-2744(78)90342-x
 Hongo S, Matsumoto T, Sato T. Purification and properties of asparagine synthetase from rat liver. Biochimica et Biophysica Acta (BBA) - Enzymology. 1978 Jan;522(1):258–66. doi: 10.1016/0005-2744(78)90342-x.
cysteine biosynthesis

Accession ID: BioCyc:HUMAN_PWY-6292
  • 10.1016/0076-6879(87)43065-6
 Griffith OW. Mammalian sulfur amino acid metabolism: an overview. Methods Enzymol. 1987;143():366–76. doi: 10.1016/0076-6879(87)43065-6. PMID: 3309559.
superpathway of methionine degradation

Accession ID: BioCyc:HUMAN_PWY-5328		 -
molybdenum cofactor biosynthesis

Accession ID: BioCyc:HUMAN_PWY-6823		 -
fatty acid α-oxidation III

Accession ID: BioCyc:HUMAN_PWY66-388
  • 10.1074/jbc.m413362200
 Foulon V, Sniekers M, Huysmans E, Asselberghs S, Mahieu V, Mannaerts GP, Van Veldhoven PP, Casteels M. Breakdown of 2-hydroxylated straight chain fatty acids via peroxisomal 2-hydroxyphytanoyl-CoA lyase: a revised pathway for the alpha-oxidation of straight chain fatty acids. J Biol Chem. 2005 Mar 18;280(11):9802–12. doi: 10.1074/jbc.m413362200. PMID: 15644336.