Pathways Knowlegdes

Necessitatibus eius consequatur ex aliquid fuga eum quidem sint consectetur velit


Pathway DOIs Note
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-OGU-8932729
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Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-LPE-8932729
-
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-SIT-8932729
-
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-PPE-8932729
-
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-OLO-8932729
-
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-STU-8932729
-
Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-OBR-8932729
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Responses to stimuli: abiotic stimuli and stresses

Accession ID: Plant Reactome:R-ADU-8932729
-
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-LAN-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Response to heavy metals

Accession ID: Plant Reactome:R-ORU-9618278
-
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-MAC-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-TCA-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-HVU-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-TAE-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Response to heavy metals

Accession ID: Plant Reactome:R-TDI-9618278
-
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-OGU-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-PVU-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-OPU-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-PHA-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.
Arsenic uptake and detoxification

Accession ID: Plant Reactome:R-PHH-9618218
  • 10.1007/s11248-012-9600-8
  • 10.1016/j.jhazmat.2010.02.028
  • 10.1016/j.scitotenv.2018.06.030
  • 10.1021/es303649v
  • 10.1038/nature04590
  • 10.1073/pnas.0802361105
  • 10.1073/pnas.1414968111
  • 10.1093/jxb/err158
  • 10.1093/jxb/erw362
  • 10.1093/pcp/pci172
  • 10.1104/pp.010733
  • 10.1104/pp.109.140350
  • 10.1104/pp.109.146126
  • 10.1104/pp.111.178921
  • 10.1104/pp.16.01332
  • 10.1111/j.1469-8137.2008.02716.x
  • 10.1111/nph.14572
  • 10.1111/pce.12138
  • 10.3389/fpls.2017.00268
  • 10.3389/fpls.2017.02197
Kumarathilaka P, Seneweera S, Meharg A, Bundschuh J. Arsenic accumulation in rice (Oryza sativa L.) is influenced by environment and genetic factors. Sci Total Environ. 2018 Nov 15;642():485–96. doi: 10.1016/j.scitotenv.2018.06.030. PMID: 29908507.; Ye Y, Li P, Xu T, Zeng L, Cheng D, Yang M, Luo J, Lian X. OsPT4 Contributes to Arsenate Uptake and Transport in Rice. Front Plant Sci. 2017;8():2197. PMID: 29312424; PMCID: PMC5744437.; Xu J, Shi S, Wang L, Tang Z, Lv T, Zhu X, Ding X, Wang Y, Zhao FJ, Wu Z. OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice. New Phytol. 2017 Aug;215(3):1090–101. doi: 10.1111/nph.14572. PMID: 28407265.; Chen Y, Han YH, Cao Y, Zhu YG, Rathinasabapathi B, Ma LQ. Arsenic Transport in Rice and Biological Solutions to Reduce Arsenic Risk from Rice. Front Plant Sci. 2017;8():268. PMID: 28298917; PMCID: PMC5331031.; Shi S, Wang T, Chen Z, Tang Z, Wu Z, Salt DE, Chao DY, Zhao FJ. OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation. Plant Physiol. 2016 Nov;172(3):1708–19. PMID: 27702843; PMCID: PMC5100750.; Wang P, Zhang W, Mao C, Xu G, Zhao FJ. The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice. J Exp Bot. 2016 Nov;67(21):6051–9. doi: 10.1093/jxb/erw362. PMID: 27683727.; Song WY, Yamaki T, Yamaji N, Ko D, Jung KH, Fujii-Kashino M, An G, Martinoia E, Lee Y, Ma JF. A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain. Proc Natl Acad Sci U S A. 2014 Nov 04;111(44):15699–704. PMID: 25331872; PMCID: PMC4226097.; TIWARI M, SHARMA D, DWIVEDI S, SINGH M, TRIPATHI RD, TRIVEDI PK. Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance. Plant Cell & Environment. 2013 Jun 25;37(1):140–52. doi: 10.1111/pce.12138.; Jia Y, Huang H, Zhong M, Wang FH, Zhang LM, Zhu YG. Microbial arsenic methylation in soil and rice rhizosphere. Environ Sci Technol. 2013 Apr 02;47(7):3141–8. doi: 10.1021/es303649v. PMID: 23469919.; Mosa KA, Kumar K, Chhikara S, Mcdermott J, Liu Z, Musante C, White JC, Dhankher OP. Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants. Transgenic Res. 2012 Dec;21(6):1265–77. doi: 10.1007/s11248-012-9600-8. PMID: 22350764.; Wu Z, Ren H, McGrath SP, Wu P, Zhao FJ. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiol. 2011 Sep;157(1):498–508. PMID: 21715673; PMCID: PMC3165895.; Mitani-Ueno N, Yamaji N, Zhao FJ, Ma JF. The aromatic/arginine selectivity filter of NIP aquaporins plays a critical role in substrate selectivity for silicon, boron, and arsenic. J Exp Bot. 2011 Aug;62(12):4391–8. PMID: 21586431; PMCID: PMC3153687.; Baig JA, Kazi TG, Shah AQ, Kandhro GA, Afridi HI, Khan S, Kolachi NF. Biosorption studies on powder of stem of Acacia nilotica: Removal of arsenic from surface water. J Hazard Mater. 2010 Jun 15;178(1-3):941–8. doi: 10.1016/j.jhazmat.2010.02.028. PMID: 20207480.; Carey AM, Scheckel KG, Lombi E, Newville M, Choi Y, Norton GJ, Charnock JM, Feldmann J, Price AH, Meharg AA. Grain unloading of arsenic species in rice. Plant Physiol. 2010 Jan;152(1):309–19. PMID: 19880610; PMCID: PMC2799365.; Li RY, Ago Y, Liu WJ, Mitani N, Feldmann J, McGrath SP, Ma JF, Zhao FJ. The rice aquaporin Lsi1 mediates uptake of methylated arsenic species. Plant Physiol. 2009 Aug;150(4):2071–80. PMID: 19542298; PMCID: PMC2719116.; Zhao FJ, Ma JF, Meharg AA, McGrath SP. Arsenic uptake and metabolism in plants. New Phytol. 2009 Mar;181(4):777–94. doi: 10.1111/j.1469-8137.2008.02716.x. PMID: 19207683.; Ma JF, Yamaji N, Mitani N, Xu XY, Su YH, McGrath SP, Zhao FJ. Transporters of arsenite in rice and their role in arsenic accumulation in rice grain. Proc Natl Acad Sci U S A. 2008 Jul 22;105(29):9931–5. PMID: 18626020; PMCID: PMC2481375.; Ma JF, Tamai K, Yamaji N, Mitani N, Konishi S, Katsuhara M, Ishiguro M, Murata Y, Yano M. A silicon transporter in rice. Nature. 2006 Mar 30;440(7084):688–91. doi: 10.1038/nature04590. PMID: 16572174.; Sakurai J, Ishikawa F, Yamaguchi T, Uemura M, Maeshima M. Identification of 33 rice aquaporin genes and analysis of their expression and function. Plant Cell Physiol. 2005 Sep;46(9):1568–77. doi: 10.1093/pcp/pci172. PMID: 16033806.; Abedin MJ, Feldmann J, Meharg AA. Uptake kinetics of arsenic species in rice plants. Plant Physiol. 2002 Mar;128(3):1120–8. PMID: 11891266; PMCID: PMC152223.