L-ornithine degradation II (Stickland reaction)

Kenklies J, Ziehn R, Fritsche K, Pich A, Andreesen JR. Proline biosynthesis from L-ornithine in Clostridium sticklandii: purification of delta1-pyrroline-5-carboxylate reductase, and sequence and expression of the encoding gene, proC. Microbiology (Reading). 1999 Apr;145 ( Pt 4)():819–26. doi: 10.1099/13500872-145-4-819. PMID: 10220161.

Metabolites

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Hydroxylamine

Formula: NH3O (33.0214628)

CAS ID: 7803-49-8

Isoniazid

Formula: C6H7N3O (137.0589092)

CAS ID: 54-85-3

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

N-Ethylmaleimide

Formula: C6H7NO2 (125.0476762)

CAS ID: 128-53-0

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Phenylhydrazine

Formula: C6H8N2 (108.06874479999999)

CAS ID: 100-63-0

2-Methylpiperidine

Formula: C6H13N (99.1047938)

CAS ID: 109-05-7

iodoacetamide

Formula: C2H4INO (184.9337644)

CAS ID: 144-48-9

Sodium borohydride

Formula: BH4Na (38.0303734)

CAS ID: 16940-66-2

phthalate(2-)

Formula: C8H4O4 (164.0109584)

CAS ID: 3198-29-6

2-oxoglutarate(2-)

Formula: C5H4O5 (144.00587339999998)

CAS ID: 64-15-3

maleate(2-)

Formula: C4H2O4 (113.99530920000001)

CAS ID: 142-44-9

pyruvate

Formula: C3H3O3 (87.00821880000001)

CAS ID: 57-60-3

L-lysinium(1+)

Formula: C6H15N2O2 (147.113347)

CAS ID: 56-87-1



Enzyme

EC Number name full name note
1.21.4.1 D-proline reductase 5-aminopentanoate:[PrdC protein] oxidoreductase (cyclizing)
1.4.1.26 2,4-diaminopentanoate dehydrogenase (NAD+) (2R,4S)-2,4-diaminopentanoate:NADP+ oxidoreductase (deaminating)
2.3.1.263 2-amino-4-oxopentanoate thiolase acetyl-CoA:D-alanine acetyltransferase
5.1.1.12 ornithine racemase ornithine racemase
5.4.3.5 D-ornithine 4,5-aminomutase D-ornithine 4,5-aminomutase


Proteins

Protein ID name full name
C1FW05 ord 2,4-diaminopentanoate dehydrogenase
C1FW06 ortA 2-amino-4-ketopentanoate thiolase alpha subunit
C1FW07 ortB 2-amino-4-ketopentanoate thiolase beta subunit
C1FW08 orr Ornithine racemase
E3PY95 oraE D-ornithine 4,5-aminomutase subunit beta
E3PY96 oraS D-ornithine 4,5-aminomutase subunit alpha
Q9Z4P6 prdA D-proline reductase proprotein PrdA
Q9Z4Q7 prdB D-proline reductase subunit gamma