Root gravitropism

Kirschner GK, Hochholdinger F, Salvi S, Bennett MJ, Huang G, Bhosale RA. Genetic regulation of the root angle in cereals. Trends Plant Sci. 2024 Jul;29(7):814–22. doi: 10.1016/j.tplants.2024.01.008. PMID: 38402016.; Zhang Y, He P, Ma X, Yang Z, Pang C, Yu J, Wang G, Friml J, Xiao G. Auxin-mediated statolith production for root gravitropism. New Phytol. 2019 Oct;224(2):761–74. doi: 10.1111/nph.15932. PMID: 31111487.; Wu S, Xie Y, Zhang J, Ren Y, Zhang X, Wang J, Guo X, Wu F, Sheng P, Wang J, Wu C, Wang H, Huang S, Wan J. VLN2Regulates Plant Architecture by Affecting Microfilament Dynamics and Polar Auxin Transport in Rice. Plant Cell. 2015 Oct 20;():tpc.15.00581. doi: 10.1105/tpc.15.00581.; Chavarría-Krauser A, Nagel KA, Palme K, Schurr U, Walter A, Scharr H. Spatio-temporal quantification of differential growth processes in root growth zones based on a novel combination of image sequence processing and refined concepts describing curvature production. New Phytol. 2008;177(3):811–21. doi: 10.1111/j.1469-8137.2007.02299.x. PMID: 18069960.; Blancaflor EB, Fasano JM, Gilroy S. Mapping the functional roles of cap cells in the response of Arabidopsis primary roots to gravity. Plant Physiol. 1998 Jan;116(1):213–22. PMID: 9449842; PMCID: PMC35160.; Sack FD. Plant gravity sensing. Int Rev Cytol. 1991;127():193–252. doi: 10.1016/s0074-7696(08)60695-6. PMID: 11536485.

Metabolites

ADP-glucose

Formula: C16H25N5O15P2 (589.0822360000001)

CAS ID: 2140-58-1

alpha-D-Glucose

Formula: C6H12O6 (180.0633852)

CAS ID: 492-62-6

beta-D-Glucose

Formula: C6H12O6 (180.0633852)

CAS ID: 492-61-5

H+

Formula: H (1.0078246)

CAS ID: 12408-02-5

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Hydrogen peroxide

Formula: H2O2 (34.0054792)

CAS ID: 7722-84-1

Indole-3-acetate

Formula: C10H9NO2 (175.0633254)

CAS ID: 87-51-4

NADP+

Formula: C21H29N7O17P3 (744.0832754)

CAS ID: 53-59-8

NADPH

Formula: C21H30N7O17P3 (745.0911)

CAS ID: 2646-71-1

Oxygen

Formula: O2 (31.98983)

CAS ID: 7782-44-7

Superoxide

Formula: O2 (31.98983)

CAS ID: 11062-77-4

Auxin

Formula: C10H8NO2 (174.0555008)

CAS ID:

NADPH(4-)

Formula: C21H26N7O17P3 (741.0598016)

CAS ID: 53-57-6

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:

NADP(3-)

Formula: C21H25N7O17P3 (740.051977)

CAS ID: 53-59-8



Enzyme

EC Number name full name note
2.1.1.4 acetylserotonin O-methyltransferase S-adenosyl-L-methionine:N-acetylserotonin O-methyltransferase
2.1.1.42 flavone 3'-O-methyltransferase S-adenosyl-L-methionine:3'-hydroxyflavone 3'-O-methyltransferase
2.1.1.68 caffeate O-methyltransferase S-adenosyl-L-methionine:3,4-dihydroxy-trans-cinnamate 3-O-methyltransferase
2.7.11.1 non-specific serine/threonine protein kinase ATP:protein phosphotransferase (non-specific)
2.7.7.27 glucose-1-phosphate adenylyltransferase ATP:alpha-D-glucose-1-phosphate adenylyltransferase


Proteins

Protein ID name full name