DNA Damage Bypass

Saugar I, Ortiz-Bazán MÁ, Tercero JA. Tolerating DNA damage during eukaryotic chromosome replication. Exp Cell Res. 2014 Nov 15;329(1):170–7. doi: 10.1016/j.yexcr.2014.07.009. PMID: 25038291.; Ulrich HD. Timing and spacing of ubiquitin-dependent DNA damage bypass. FEBS Lett. 2011 Sep 16;585(18):2861–7. doi: 10.1016/j.febslet.2011.05.028. PMID: 21605556.; Takata K, Wood RD. Bypass specialists operate together. EMBO J. 2009 Feb 18;28(4):313–4. PMID: 19225445; PMCID: PMC2646159.; Zhu F, Zhang M. DNA polymerase zeta: new insight into eukaryotic mutagenesis and mammalian embryonic development. World J Gastroenterol. 2003 Jun;9(6):1165–9. PMID: 12800216; PMCID: PMC4611776.; Friedberg EC, Fischhaber PL, Kisker C. Error-prone DNA polymerases: novel structures and the benefits of infidelity. Cell. 2001 Oct 05;107(1):9–12. doi: 10.1016/s0092-8674(01)00509-8. PMID: 11595180.; Lehmann AR. Replication of UV-damaged DNA: new insights into links between DNA polymerases, mutagenesis and human disease. Gene. 2000 Jul 25;253(1):1–12. doi: 10.1016/s0378-1119(00)00250-x. PMID: 10925197.

Metabolites

H2O

Formula: H2O (18.0105642)

CAS ID: 7732-18-5

Magnesium cation

Formula: Mg (23.98505)

CAS ID: 22537-22-0

ATP(4-)

Formula: C10H12N5O13P3 (502.9644492)

CAS ID:

ADP(3-)

Formula: C10H12N5O10P2 (424.0059412)

CAS ID:



Enzyme

EC Number name full name note
3.1.11.-
2.3.2.23 E2 ubiquitin-conjugating enzyme S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine:[E2 ubiquitin-conjugating enzyme] ubiquitinyl transferase
2.7.7.7 DNA-directed DNA polymerase deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed)
3.4.19.12 ubiquitinyl hydrolase 1
3.6.4.6 vesicle-fusing ATPase ATP phosphohydrolase (vesicle-fusing)


Proteins

Protein ID name full name