Depurination

Parikh SS, Mol CD, Slupphaug G, Bharati S, Krokan HE, Tainer JA. Base excision repair initiation revealed by crystal structures and binding kinetics of human uracil-DNA glycosylase with DNA. EMBO J. 1998 Sep 01;17(17):5214–26. PMID: 9724657; PMCID: PMC1170849.; Slupphaug G, Mol CD, Kavli B, Arvai AS, Krokan HE, Tainer JA. A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA. Nature. 1996 Nov 07;384(6604):87–92. doi: 10.1038/384087a0. PMID: 8900285.

Metabolites

Adenine

Formula: C5H5N5 (135.054493)

CAS ID: 73-24-5

1,N6-Ethenoadenine

Formula: C7H5N5 (159.054493)

CAS ID: 13875-63-3

spiroiminodihydantoin

Formula: C5H5N5O3 (183.039238)

CAS ID: 480996-13-2

5-guanidinohydantoin

Formula: C4H7N5O2 (157.0599722)

CAS ID: 104184-01-2



Enzyme

EC Number name full name note
3.2.2.-
3.2.2.21 DNA-3-methyladenine glycosylase II alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine)
3.2.2.31 adenine glycosylase adenine-DNA deoxyribohydrolase (adenine-releasing)
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase


Proteins

Protein ID name full name