D-Ribulose 5-phosphate (BioCAD00000009444)
blood cellular cytoplasm saliva prostate microbial natural products
Metabolite Card
Formula: C5H11O8P (230.0192)
SMILES: OCC(=O)[C@H](O)[C@H](O)COP(O)(O)=O
Synonyms [en]
D-Ribulose 5-phosphate; ribulose 5-phosphate; D-erythro-pent-2-ulose 5-(dihydrogen phosphate); 5-O-phosphono-D-ribulose; D-Ribulose-5-phosphate; ribulose-5P
Last reviewed on 2024-06-28.
Cite this Page
D-Ribulose 5-phosphate. 数据之源，洞见之始. SMRUCC genomics institute, a synthetic life researcher from China.
https://biocad_registry.innovation.ac.cn/s/(-)-arctiin
(retrieved
2026-01-03) (CAD Registry RN: BioCAD00000009444). Licensed
under the Attribution-Noncommercial 4.0 International License (CC BY-NC 4.0).
Note
D-Ribulose 5-phosphate is a metabolite in the following pathways: pentose phosphate pathway, pentose and glucuronate interconversions, and riboflavin metabolism (KEGG).
DBLinks
- CAS Registry Number: 551-85-9
- PubChem CID: 439184
- ChEBI: 17363
- HMDB: HMDB0000618
- LipidMaps:
- KEGG: C00199
- BioCyc: RIBULOSE-5P
- NCBI MeSH: ribulose 5-phosphate
- Wikipedia: Ribulose_5-phosphate
Other DBLinks
- CAS Registry Number: 4151-19-3
- CAS Registry Number: 551-85-9
- PubChem: 439184
- ChEBI: ChEBI:17363
- HMDB: HMDB0000618
- KEGG: C00199
- BioCyc: RIBULOSE-5P
- NCBI MeSH: ribulose 5-phosphate
- Wikipedia: Ribulose_5-phosphate
- DrugBank: DB04034
- RefMet: RM0020730
- MoNA: FiehnLib000610
- MoNA: FiehnLib000611
- MoNA: FiehnLib000612
- MoNA: HMDB0000618_c_ms_1802
- MoNA: HMDB0000618_c_ms_1811
- MoNA: PR100553
- Metlin: METLIN_371
- Coconut NaturalProduct: CNP0198905.1
- Coconut NaturalProduct: CNP0527219.1
Class / Ontology
- WishartLab ClassyFire: [Carbohydrates and carbohydrate conjugates] Carbohydrates and carbohydrate conjugates
- RefMet: [Pentose phosphates] Pentose phosphates
- ChEBI: [CHEBI:17363] D-ribulose 5-phosphate
- Coconut NaturalProduct: [Monosaccharides] Monosaccharides
| ID | EC Number | Name |
|---|---|---|
| KEGG:R01056 | 5.3.1.6 | D-ribose-5-phosphate aldose-ketose-isomerase |
| KEGG:R01523 | 2.7.1.19 | ATP:D-ribulose-5-phosphate 1-phosphotransferase |
| KEGG:R01524 | 1.1.1.137 | D-ribitol-5-phosphate:NAD+ 2-oxidoreductase |
| KEGG:R01525 | 1.1.1.137 | D-ribitol-5-phosphate:NADP+ 2-oxidoreductase |
| KEGG:R01526 | 2.7.1.16 | ATP:D-ribulose 5-phosphotransferase |
| KEGG:R01528 | 1.1.1.44 | 6-phospho-D-gluconate:NADP+ 2-oxidoreductase (decarboxylating) |
| KEGG:R01529 | 5.1.3.1 | D-ribulose-5-phosphate 3-epimerase |
| KEGG:R01530 | 5.3.1.13 | D-arabinose-5-phosphate aldose-ketose-isomerase |
| KEGG:R05338 | 4.1.2.43 | D-arabino-hex-3-ulose-6-phosphate formaldehyde-lyase (D-ribulose-5-phosphate-forming) |
| KEGG:R07281 | 4.1.99.12 | D-ribulose 5-phosphate formate-lyase (L-3,4-dihydroxybutan-2-one 4-phosphate-forming) |
| KEGG:R07456 | 4.3.3.6 | D-ribulose 5-phosphate,D-glyceraldehyde 3-phosphate pyridoxal 5'-phosphate-lyase |
| KEGG:R10221 | 1.1.1.343 | 6-phospho-D-gluconate:NAD+ 2-oxidoreductase (decarboxylating) |
| KEGG:R12150 | 4.1.99.24 | L-tyrosine:D-ribulose-5-phosphate lyase (isonitrile-forming) |
| KEGG:R12151 | 4.1.99.25 | L-tryptophan:D-ribulose-5-phosphate lyase (isonitrile-forming) |
| BioCyc:RIB5PISOM-RXN | 5.3.1.6 | RIBOSE-5P<=>RIBULOSE-5P |
| BioCyc:RIBULP3EPIM-RXN | 5.1.3.1 | RIBULOSE-5P<=>XYLULOSE-5-PHOSPHATE |
| BioCyc:RXN0-7141 | 1.17.1.- | RIBULOSE-5P --> DEOXYXYLULOSE-5P |
| BioCyc:DIOHBUTANONEPSYN-RXN | 4.1.99.12 | RIBULOSE-5P --> PROTON + DIHYDROXY-BUTANONE-P + FORMATE |
| BioCyc:RXN-9952 | 1.1.1.44 | CPD-2961 + NADP --> RIBULOSE-5P + CARBON-DIOXIDE + NADPH |
| BioCyc:DARAB5PISOM-RXN | 5.3.1.13 | ARABINOSE-5P<=>RIBULOSE-5P |
Taxonomy Source
- Escherichia coli [ncbi taxid: 562]
- Homo sapiens [ncbi taxid: 9606]
- Mus musculus [ncbi taxid: 10090]
- Streptomyces davawensis [ncbi taxid: ]
Pathway Synthetic
| pathway id | name |
|---|---|
| BioCyc:LEISH_PWY3IU-99 | superpathway of central carbon metabolism |
| BioCyc:TRYPANO_PWY-1861 | formaldehyde assimilation II (RuMP Cycle) |
| BioCyc:TRYPANO_P21-PWY | pentose phosphate pathway (partial) |
| BioCyc:TRYPANO_RIBOSYN2-PWY | flavin biosynthesis I (bacteria and plants) |
| BioCyc:CAULONA1000_OXIDATIVEPENT-PWY | pentose phosphate pathway (oxidative branch) |
| BioCyc:CAULONA1000_PENTOSE-P-PWY | pentose phosphate pathway |
| BioCyc:CAULONA1000_P21-PWY | pentose phosphate pathway (partial) |
| BioCyc:LEISH_OXIDATIVEPENT-PWY | pentose phosphate pathway (oxidative branch) |
| BioCyc:TRYPANO_RUMP-PWY | formaldehyde oxidation I |
| BioCyc:TRYPANO_NONOXIPENT-PWY | pentose phosphate pathway (non-oxidative branch) |
| BioCyc:TRYPANO_P122-PWY | heterolactic fermentation |
| BioCyc:CAULONA1000_RUMP-PWY | formaldehyde oxidation I |
| BioCyc:LEISH_NONOXIPENT-PWY | pentose phosphate pathway (non-oxidative branch) |
| BioCyc:TRYPANO_P124-PWY | Bifidobacterium shunt |
| BioCyc:TRYPANO_OXIDATIVEPENT-PWY | pentose phosphate pathway (oxidative branch) |
| BioCyc:LEISH_PENTOSE-P-PWY | pentose phosphate pathway |
| BioCyc:TRYPANO_P185-PWY | formaldehyde assimilation III (dihydroxyacetone cycle) |
| BioCyc:TRYPANO_PENTOSE-P-PWY | pentose phosphate pathway |
| BioCyc:TRYPANO_PWY-1269 | CMP-KDO biosynthesis I |
| BioCyc:CAULONA1000_GLUCONSUPER-PWY | superpathway of gluconate degradation |